GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002057-TA|BGIBMGA002057-PA|undefined
         (109 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   4.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory
          receptor candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 25 RLSWANSRIIGLNFSLL 41
          R SW ++R++   F+LL
Sbjct: 47 RFSWKSARVVYALFTLL 63


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory
          receptor candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 25 RLSWANSRIIGLNFSLL 41
          R SW ++R++   F+LL
Sbjct: 47 RFSWKSARVVYALFTLL 63


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676
Number of Sequences: 317
Number of extensions: 298
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 109
length of database: 114,650
effective HSP length: 49
effective length of query: 60
effective length of database: 99,117
effective search space:  5947020
effective search space used:  5947020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)