GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002056-TA|BGIBMGA002056-PA|IPR011072|Protein kinase
PKN/PRK1, effector
         (412 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    28   0.14 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    28   0.14 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   4.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   9.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   9.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 164  EHNAEQLARELNCAREKVVHIFRYLYSLYLVTTMTLT-QEDL 204
            E + ++++ EL   R+K+V  F  L SLY++    LT ++DL
Sbjct: 1208 EDDKKKVSAELKDLRDKMVFTFLMLNSLYVIVIFLLTLKKDL 1249


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 164  EHNAEQLARELNCAREKVVHIFRYLYSLYLVTTMTLT-QEDL 204
            E + ++++ EL   R+K+V  F  L SLY++    LT ++DL
Sbjct: 1208 EDDKKKVSAELKDLRDKMVFTFLMLNSLYVIVIFLLTLKKDL 1249


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 90  RVKYLQAQQLVEEQRRQXXXXXXXNTR---ISEQINLEIQRVKLKFQEKLQELAPIPDLL 146
           R  Y  AQ LVE +R           R   I+E +NL  +++K+ FQ +  +      + 
Sbjct: 92  RTAYTSAQ-LVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKK-EQMN 149

Query: 147 KATQMRLKDAQQAQAIAEHNAEQLA 171
           K +  R   A+ A +++  +    A
Sbjct: 150 KVSTPRSSPAETASSLSPQSVASTA 174


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 90  RVKYLQAQQLVEEQRRQXXXXXXXNTR---ISEQINLEIQRVKLKFQEKLQELAPIPDLL 146
           R  Y  AQ LVE +R           R   I+E +NL  +++K+ FQ +  +      + 
Sbjct: 83  RTAYTSAQ-LVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKK-EQMN 140

Query: 147 KATQMRLKDAQQAQAIAEHNAEQLA 171
           K +  R   A+ A +++  +    A
Sbjct: 141 KVSTPRSSPAETASSLSPQSVASTA 165


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 212 IGRGNKDQTVHVLLHNSLKPPEKP 235
           IG   ++   + L+ N++ PPE P
Sbjct: 662 IGSNQRNFLKNALMSNNILPPESP 685


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 36  GLATHTNMLMGSKEQAFEQEVNVRALKQCYREAREEIDELRTLMKEQ 82
           GL T T +   ++ +      +   L+Q      EE D+L  ++KE+
Sbjct: 121 GLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEVLKEE 167


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 36  GLATHTNMLMGSKEQAFEQEVNVRALKQCYREAREEIDELRTLMKEQ 82
           GL T T +   ++ +      +   L+Q      EE D+L  ++KE+
Sbjct: 121 GLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEVLKEE 167


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.127    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,747
Number of Sequences: 317
Number of extensions: 2630
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 8
length of query: 412
length of database: 114,650
effective HSP length: 58
effective length of query: 354
effective length of database: 96,264
effective search space: 34077456
effective search space used: 34077456
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)