GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002055-TA|BGIBMGA002055-PA|undefined
         (162 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93121-1|AAB88727.1|  753|Homo sapiens M-phase phosphoprotein-1 ...    32   0.81 
AY282407-1|AAP40331.1| 1116|Homo sapiens M-phase phosphoprotein ...    32   0.81 
AL157400-6|CAI16830.1| 1820|Homo sapiens M-phase phosphoprotein ...    32   0.81 
AL157400-5|CAI16831.1| 1780|Homo sapiens M-phase phosphoprotein ...    32   0.81 
AL157389-3|CAI12887.1| 1780|Homo sapiens M-phase phosphoprotein ...    32   0.81 
AL157389-2|CAI12886.1| 1820|Homo sapiens M-phase phosphoprotein ...    32   0.81 
AB033337-1|BAB69456.1| 1820|Homo sapiens mitotic kinesin-related...    32   0.81 
AK024959-1|BAB15043.1|  696|Homo sapiens protein ( Homo sapiens ...    31   1.9  
BC125087-1|AAI25088.1|  568|Homo sapiens CCDC41 protein protein.       30   4.3  
BC125086-1|AAI25087.1|  634|Homo sapiens CCDC41 protein protein.       30   4.3  
BC107746-1|AAI07747.1|  218|Homo sapiens Unknown (protein for IM...    30   4.3  
AF155115-1|AAD42881.1|  472|Homo sapiens NY-REN-58 antigen protein.    30   4.3  

>U93121-1|AAB88727.1|  753|Homo sapiens M-phase phosphoprotein-1
          protein.
          Length = 753

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3  KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
          K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 7  KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 42


>AY282407-1|AAP40331.1| 1116|Homo sapiens M-phase phosphoprotein 1
           protein.
          Length = 1116

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3   KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
           K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 370 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 405


>AL157400-6|CAI16830.1| 1820|Homo sapiens M-phase phosphoprotein 1
            protein.
          Length = 1820

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3    KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
            K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 1074 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 1109


>AL157400-5|CAI16831.1| 1780|Homo sapiens M-phase phosphoprotein 1
            protein.
          Length = 1780

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3    KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
            K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 1034 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 1069


>AL157389-3|CAI12887.1| 1780|Homo sapiens M-phase phosphoprotein 1
            protein.
          Length = 1780

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3    KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
            K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 1034 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 1069


>AL157389-2|CAI12886.1| 1820|Homo sapiens M-phase phosphoprotein 1
            protein.
          Length = 1820

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3    KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
            K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 1074 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 1109


>AB033337-1|BAB69456.1| 1820|Homo sapiens mitotic kinesin-related
            protein protein.
          Length = 1820

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 3    KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
            K   +E    QI++LQ E+K    EN  L EK HKN
Sbjct: 1074 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN 1109


>AK024959-1|BAB15043.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21306 fis, clone COL02125. ).
          Length = 696

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 3   KDQNLETCRAQIKRLQGELKLLSKENCALLEKIHKN 38
           K   +E    QI++LQ E+K    EN  L E+ HKN
Sbjct: 285 KSHQIEELEQQIEKLQAEVKGYKDENNRLKEREHKN 320


>BC125087-1|AAI25088.1|  568|Homo sapiens CCDC41 protein protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 8   ETCRAQIKRLQGELKLLSKENCALLEKIHKNNPKDNRVFDVTQAQELINKLE 59
           ++   + +RL+ EL+  S++N  L+ K+HK   + N +    +  +  NKLE
Sbjct: 238 QSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTLSSKVKELKHSNKLE 289


>BC125086-1|AAI25087.1|  634|Homo sapiens CCDC41 protein protein.
          Length = 634

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 8   ETCRAQIKRLQGELKLLSKENCALLEKIHKNNPKDNRVFDVTQAQELINKLE 59
           ++   + +RL+ EL+  S++N  L+ K+HK   + N +    +  +  NKLE
Sbjct: 263 QSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTLSSKVKELKHSNKLE 314


>BC107746-1|AAI07747.1|  218|Homo sapiens Unknown (protein for
           IMAGE:6621591) protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 8   ETCRAQIKRLQGELKLLSKENCALLEKIHKNNPKDNRVFDVTQAQELINKLE 59
           ++   + +RL+ EL+  S++N  L+ K+HK   + N +    +  +  NKLE
Sbjct: 142 QSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTLSSKVKELKHSNKLE 193


>AF155115-1|AAD42881.1|  472|Homo sapiens NY-REN-58 antigen protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 8   ETCRAQIKRLQGELKLLSKENCALLEKIHKNNPKDNRVFDVTQAQELINKLE 59
           ++   + +RL+ EL+  S++N  L+ K+HK   + N +    +  +  NKLE
Sbjct: 142 QSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTLSSKVKELKHSNKLE 193


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,089,648
Number of Sequences: 224733
Number of extensions: 533745
Number of successful extensions: 2118
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2106
Number of HSP's gapped (non-prelim): 12
length of query: 162
length of database: 73,234,838
effective HSP length: 84
effective length of query: 78
effective length of database: 54,357,266
effective search space: 4239866748
effective search space used: 4239866748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)