GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002054-TA|BGIBMGA002054-PA|undefined
         (225 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   4.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   5.6  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 5   RSKHRLGLRQETSPKSNAVDQSSSS 29
           R ++RL  + +TS  S++ D SSSS
Sbjct: 438 RDQYRLRKQNDTSSDSSSSDDSSSS 462


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 5   RSKHRLGLRQETSPKSNAVDQSSSS 29
           R ++RL  + +TS  S++ D SSSS
Sbjct: 438 RDQYRLRKQNDTSSDSSSSDDSSSS 462


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 141 VKELGDRNELLLREMERFDRLTRSLQKIVGAEVAQQRRPRDE 182
           +K  GDR   LL + +RFD   R L++ +      QR+ + E
Sbjct: 231 LKSHGDR---LLEDRQRFDNYKRELKETMIRNQQLQRQRKQE 269


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.130    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,155
Number of Sequences: 2123
Number of extensions: 7406
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 225
length of database: 516,269
effective HSP length: 62
effective length of query: 163
effective length of database: 384,643
effective search space: 62696809
effective search space used: 62696809
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)