GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002053-TA|BGIBMGA002053-PA|IPR004853|Protein of unknown
function DUF250
         (330 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   1.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   7.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   7.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 68  FGRSAKLVQYPPLDSGIARRIWP 90
           F  + K   +P LDS ++ R WP
Sbjct: 261 FNEAIKEAYFPKLDSLVSSRAWP 283


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 77  YPPLDSGIARRIWP 90
           +P LDS +A R WP
Sbjct: 270 FPKLDSLVASRTWP 283


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 289 SWLNFVGLNISVFASLLYTYVTF 311
           S + F  +N ++F SLL T VT+
Sbjct: 385 SLVGFFDVNRNLFKSLLATMVTY 407


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 247 VLSYSVMLCTQYNSALTTTIIGCLKNILVTYL 278
           +  +S +L T Y+S L    + C+  +++  L
Sbjct: 277 IFGWSFLLFTLYSSLLLLDYVSCVVALIILIL 308


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 247 VLSYSVMLCTQYNSALTTTIIGCLKNILVTYL 278
           +  +S +L T Y+S L    + C+  +++  L
Sbjct: 203 IFGWSFLLFTLYSSLLLLDYVSCVVALIILIL 234


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,699
Number of Sequences: 317
Number of extensions: 2641
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 5
length of query: 330
length of database: 114,650
effective HSP length: 57
effective length of query: 273
effective length of database: 96,581
effective search space: 26366613
effective search space used: 26366613
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)