Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002052-TA|BGIBMGA002052-PA|IPR011765|Peptidase M16,
N-terminal, IPR007863|Peptidase M16, C-terminal
(466 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 283 4e-77
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 107 3e-24
SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core ... 39 0.002
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 37 0.005
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 31 0.26
SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 1.4
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 28 2.4
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 27 5.6
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 283 bits (694), Expect = 4e-77
Identities = 149/435 (34%), Positives = 241/435 (55%), Gaps = 9/435 (2%)
Query: 35 IPDTQYSRLDNGLTIATEERESYNTCVGLF-IDAGSRYEDNFENGVGHFFEHLAFKGTKC 93
+P T+ + L NGLT+ATE T L +DAGSR E NG HF EHLAFKGTK
Sbjct: 19 LPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKN 78
Query: 94 RTKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNFATADIEL 153
R++ LE + ++GA +T+RE YYA +P V +L D + N++ + + +E
Sbjct: 79 RSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVER 138
Query: 154 QRKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMGPSCNLYNFTDMTISRYLAKR 213
+R+++ E E DK ++ V++D+LH+TA+QG PL +T++GP N+ + T + +Y+
Sbjct: 139 ERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDN 198
Query: 214 FDPARTVLVAVGGVKHDQMVFLANNYLNKLTP-LKCVDIGV-----ARYTGSEIRFRNDS 267
+ R ++ + G + H+++V LA Y L P + + +G R+ GSEIR R+D
Sbjct: 199 YRSDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAPRGLKPRFVGSEIRARDDD 258
Query: 268 LPVANCVMVIEGPSFCHKDQIVMEVAASIISGWDKSQPGGINHAVRIAREASTDKFCDSY 327
P AN + +EG S+ H D V +II WD++ + + R++ + +S+
Sbjct: 259 SPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSF 318
Query: 328 KAVNITYKDTSLWGVQFMGPSV-ELEDMVLSIQGEWMNMCHTITDAEVERAKRELKTKVL 386
+ + +Y DT LWG+ + ++ ++D+V W + T AEVERAK +L+ +L
Sbjct: 319 MSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLT-VATRAEVERAKAQLRASLL 377
Query: 387 SKTESCAGTCHEIGRWVLYNGRRPPLHERICAIDSVFAQDIRRVCNKYIYDKCPAVAAVG 446
+S +IGR +L GRR E I + +D+ RV ++ I+DK AV+AVG
Sbjct: 378 LSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVG 437
Query: 447 PTEGLPDYTKIRAGM 461
EGL DY +IR+ +
Sbjct: 438 SIEGLLDYNRIRSSI 452
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 107 bits (257), Expect = 3e-24
Identities = 95/414 (22%), Positives = 176/414 (42%), Gaps = 18/414 (4%)
Query: 37 DTQYSRLDNGLTIATEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKGTKCRTK 96
+ + +L NG+T + R + + +G+++ AGSRYE +GV HF + LAF+ T+
Sbjct: 45 EVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPV 104
Query: 97 TLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNFATADIELQRK 156
++ ++ + G + C T+RE + Y A + D+ + ++L + + D+ R
Sbjct: 105 GEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRD 164
Query: 157 IVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMGPSCNLYNFTDMTISRYLAKRFDP 216
+ E E + +L ++ H TAFQ L ++ + T +I YL + P
Sbjct: 165 SIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYRP 224
Query: 217 ARTVLVAVGGVKHDQMVFLANNYLNKL--TPLKCVDIGVARYTGSEIRFRNDSLP----- 269
L A G+ + + L + L ++ + YTG + + P
Sbjct: 225 EHLTL-AYAGIPQEIAKEITKELYGHLPSSSLPPLEAIPSHYTGGFMGIKKSEAPPVPYQ 283
Query: 270 --VANCVMVIEGPSFCHKDQIVMEVAASIISGWDKSQPGGINHAV--RIAREASTD-KFC 324
+ V+ +EG D + ++ G GG + R+ +
Sbjct: 284 QEFTHVVIAMEGLPVTDPDIYALACLQFLLGGGGSFSAGGPGKGMYSRLYLNVLNQYPWV 343
Query: 325 DSYKAVNITYKDTSLWG--VQFMGPSVELEDMVLSIQGEWMNMCHTITDAEVERAKRELK 382
++ A N +Y D+ L+G V + + L + I E N ++T E ERAK +LK
Sbjct: 344 ETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPL--IIRELCNTVLSVTSEETERAKNQLK 401
Query: 383 TKVLSKTESCAGTCHEIGRWV-LYNGRRPPLHERICAIDSVFAQDIRRVCNKYI 435
+ +L ES + ++GR + NG E I ID++ D+ RV + +
Sbjct: 402 SSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVL 455
>SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core
protein Qcr2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 426
Score = 38.7 bits (86), Expect = 0.002
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 46 GLTIATEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKGTKCRTKTLLEDQISS 105
G++ A E + + + I+AGSRY+ + GV H E AFK T+ R+ + +
Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQP--DAGVSHLLEKFAFKTTEERSALRITRESEL 87
Query: 106 SGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNFATADIELQRKIVYAEMIEQ 165
G TRE + A L+ L +L + + F +L +++ IE
Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKF--LPFQLTEEVLPTARIES 145
Query: 166 DKNSNTVL---YDYLHSTAF 182
+ +L LH AF
Sbjct: 146 ELFREDILRVAMAKLHEKAF 165
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 37.1 bits (82), Expect = 0.005
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 34 NIPDTQYS--RLDNGLTIA-TEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKG 90
N+ D +Y +L+N L + + E+ N + + GS+ G+ HF EHL F G
Sbjct: 18 NLDDREYRLIKLENDLEVLLVRDPETDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMG 77
Query: 91 T-KCRTKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYD 129
T K + + S I +T YY + +S+D
Sbjct: 78 TKKYPDENEYRKYLESHNGISNAYTASNNTNYYFE-VSHD 116
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 31.5 bits (68), Expect = 0.26
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
Query: 62 GLFIDAGSRYEDNFENGVGHFFEHLAFKGTKCRTKTLLEDQIS--SSGAIFKC----FTT 115
G F+ A + DN G H EHL F G+K + + + + G I C +T+
Sbjct: 45 GSFVVATEAH-DNL--GCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDINACTDVDYTS 101
Query: 116 REMVAYYADCLSYDLPRVVE-ILTDCIYNNNFATADIEL-----QRKIVYAEMIEQDKNS 169
E+ A D LP + IL+ + + F T + + +VY+EM +
Sbjct: 102 YELSAAEEDGFLRLLPVFADHILSPILSDEAFCTEVYHINGMGEESGVVYSEMQNTQSSE 161
Query: 170 NTVLYDYLHSTAFQGTP-LAQTVMGPSCNLYNFTDMTISRYLAKRFDPARTVLVAVGGVK 228
V++D + ++ + T G L + I Y + + P+ L+ G +
Sbjct: 162 TDVMFDCMRTSQYPVTSGYYYETGGHPSELRKLSIEKIREYHKEMYVPSNICLIVTGCIN 221
Query: 229 HDQMVFLANNYLNKL 243
+++ A+ + ++
Sbjct: 222 ESRLLSCASGIVKEI 236
>SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 295 SIISGWDKSQ-PGGINHAVRIAREASTDKFCDSYKAVNITYKDTSLWGVQFM 345
+I+S W + P + H + RE + ++ +A+NI YKD + W Q +
Sbjct: 247 AILSVWQGCKDPNFVLHLLGEMRENVVMRDSETREAINIVYKDVNEWPKQLL 298
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 28.3 bits (60), Expect = 2.4
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 30 DFLKNIPDTQYSRLDNGLTIATEERESYNTCVGLFIDAGSRYE-DNF------------- 75
DFLK + RLD G+TI T+ E Y DA DNF
Sbjct: 25 DFLKTGVSQIFERLDEGMTI-TKYMELYTAIHNYCADASKTITVDNFNDQTANVLGEALY 83
Query: 76 ENGVGHFFEHLAFKGTKCRTKTLLEDQISSSGAIFKCFTT 115
N V + E+LA +C ++T E+Q+++ + FTT
Sbjct: 84 NNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTT 123
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 129 DLPRVVEILTDCIYNNNFATADIELQRKIVYAEMIEQD---KNSNTVLYDYLHSTAFQGT 185
DL + V I+ C + NF ++++ R ++ + K S T+L D L ++ T
Sbjct: 602 DLHKDVLIVL-CQLSQNFILPNVDVARHVLLFILSFSPFNRKKSKTILNDTLPTSIPSYT 660
Query: 186 PLAQTVMGPSCNLY 199
P GP+ N Y
Sbjct: 661 PATHPYAGPAINAY 674
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.137 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,150,209
Number of Sequences: 5004
Number of extensions: 90272
Number of successful extensions: 223
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 210
Number of HSP's gapped (non-prelim): 9
length of query: 466
length of database: 2,362,478
effective HSP length: 75
effective length of query: 391
effective length of database: 1,987,178
effective search space: 776986598
effective search space used: 776986598
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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