GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002052-TA|BGIBMGA002052-PA|IPR011765|Peptidase M16,
N-terminal, IPR007863|Peptidase M16, C-terminal
         (466 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   3.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    24   3.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   5.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 146 FATADIELQRKIVYAEMIEQDKNS-NTVL 173
           FAT DI+   +I +  M +  KNS N+++
Sbjct: 606 FATKDIKQNEEITFDYMCQSSKNSENSIM 634


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 292 VAASIISGWDKSQPGGI 308
           +  S+I G+DK Q GGI
Sbjct: 115 IGLSLIKGFDKKQGGGI 131


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 70  RYEDNFENGVGHFFEHLAFKGTKCRTKTLLEDQISSSGAIFKCFTTREMVAYY 122
           R+  +F NG+ +  E+L F   + R  + + +  +  G      + R    YY
Sbjct: 91  RHVRDFLNGLDNLHEYLKFSYPRMRAPSFICENETRQGLTLHYRSKRRGFVYY 143


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,107
Number of Sequences: 429
Number of extensions: 6023
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 466
length of database: 140,377
effective HSP length: 60
effective length of query: 406
effective length of database: 114,637
effective search space: 46542622
effective search space used: 46542622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)