GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002050-TA|BGIBMGA002050-PA|IPR008257|Peptidase M19,
renal dipeptidase
         (122 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    26   0.089
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   5.9  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
          protein protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 0.089
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 37 LKEVPLIDGHNDLPWNIRKFLRNQVNDFELDT 68
          LKE P I+G   +P  ++K + N  N+FE DT
Sbjct: 39 LKEQPKIEGKVQVPEALKK-IYNIQNNFEYDT 69


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
          protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 85 DLPRLREGMVGAQ 97
          D P LREG+ GA+
Sbjct: 31 DNPSLREGLKGAR 43


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,364
Number of Sequences: 317
Number of extensions: 830
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 122
length of database: 114,650
effective HSP length: 50
effective length of query: 72
effective length of database: 98,800
effective search space:  7113600
effective search space used:  7113600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)