GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002050-TA|BGIBMGA002050-PA|IPR008257|Peptidase M19,
renal dipeptidase
         (122 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...    28   1.6  
U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical p...    28   2.1  
AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z81524-4|CAB04250.1|  528|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z92817-6|CAB60324.1|  384|Caenorhabditis elegans Hypothetical pr...    26   6.5  
Z83111-7|CAB05534.2|  384|Caenorhabditis elegans Hypothetical pr...    26   6.5  
AC006617-4|AAF39771.1|  291|Caenorhabditis elegans Hypothetical ...    26   6.5  
Z92806-3|CAB07256.1|  202|Caenorhabditis elegans Hypothetical pr...    26   8.6  
Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical pr...    26   8.6  
U97191-7|AAB52429.1|  241|Caenorhabditis elegans Hypothetical pr...    26   8.6  
U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    26   8.6  
AF040653-1|ABC48248.1|  312|Caenorhabditis elegans Hypothetical ...    26   8.6  

>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
          protein T25G12.5 protein.
          Length = 412

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 52 NIRKFLRNQVNDFELDTDLTVVEPWSISKYSH 83
          N+RKF+ ++V     + D T+  PW I K +H
Sbjct: 38 NVRKFVADEVIPVAGEYDKTMEYPWEIIKKAH 69


>U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical
          protein ZK1248.1 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 49 LPWNIRKFLRNQVNDFELDTDLTV---VEPWSISKYSHTDLPRLREGMVGAQY 98
          LP NI +    +  DF +D  +     V PW + +Y   DL +L+ GMV A+Y
Sbjct: 23 LPKNIIQEHIKKHADFSVDPCVDFYAHVCPWKVERYFMEDLSKLKAGMV-AKY 74


>AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical
           protein Y54G11A.2 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 26  DRERLEIAKQILKEVPLIDGHNDLPWNIRKFLRNQVNDFELDTD 69
           DRE+ E+  Q   E   I+G+ D+ W+     RN V+   L  D
Sbjct: 167 DREKKEMLAQ--NEKKRIEGYEDVDWDAGATTRNDVDPGNLSDD 208


>Z81524-4|CAB04250.1|  528|Caenorhabditis elegans Hypothetical
           protein F32H5.4 protein.
          Length = 528

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)

Query: 29  RLEIAKQILKEVPLIDGH-NDLPWN-IRKFLRNQ 60
           R+E A+Q+LK +  +DG+ +D  WN I + L+ +
Sbjct: 263 RIEEARQVLKHIMEVDGNTSDHSWNEIEEMLQTE 296


>Z92817-6|CAB60324.1|  384|Caenorhabditis elegans Hypothetical
           protein F57G8.6 protein.
          Length = 384

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 62  NDFELDTDLTVVEPWSISKYSHTDL 86
           N F LD D T V+ W +S Y   DL
Sbjct: 233 NGFILDFDKTKVDFWKLSNYPAKDL 257


>Z83111-7|CAB05534.2|  384|Caenorhabditis elegans Hypothetical
           protein F57G8.6 protein.
          Length = 384

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 62  NDFELDTDLTVVEPWSISKYSHTDL 86
           N F LD D T V+ W +S Y   DL
Sbjct: 233 NGFILDFDKTKVDFWKLSNYPAKDL 257


>AC006617-4|AAF39771.1|  291|Caenorhabditis elegans Hypothetical
           protein C39B5.7 protein.
          Length = 291

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 57  LRNQVNDFELDTDLTVVEPWSISKYSHTDLPRLREGMVGAQYIEDIMMWHLKNTALS 113
           + + +ND  L+     VE   +  + H D+  +      A+ ++DI++WH     LS
Sbjct: 116 ITSSINDM-LENKCIAVESVVLYNFPHDDILNIISSCQ-AEVLKDIVLWHRDGVELS 170


>Z92806-3|CAB07256.1|  202|Caenorhabditis elegans Hypothetical
           protein K10G4.3 protein.
          Length = 202

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 49  LPWNIRKFLRNQVNDFELDTDLTVVEPWSISKYSHTDLPRLREGMVGAQYIEDIMMWHLK 108
           L  N +K+L   V++F +DT    + PW    ++H  L   +  +  A+ I     W L+
Sbjct: 47  LSLNSKKYLAILVDEFCMDTPRYGISPW----FAHYILCYCKHNLDDAREILIANKWKLE 102

Query: 109 N 109
           N
Sbjct: 103 N 103


>Z74036-3|CAA98488.1|  517|Caenorhabditis elegans Hypothetical
           protein F55C10.4 protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 59  NQVNDFELDTDLTVVEPWSISKYSHTDLPRL 89
           N ++++E    L  +EPW   K+S TD P L
Sbjct: 201 NLISEYE-KMGLVSIEPWLTIKFSSTDGPYL 230


>U97191-7|AAB52429.1|  241|Caenorhabditis elegans Hypothetical
           protein F53F10.1 protein.
          Length = 241

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 8/53 (15%)

Query: 67  DTDLTVVEPWSISKYSHTD--------LPRLREGMVGAQYIEDIMMWHLKNTA 111
           DTD+  +  W++ +  HTD        L  L+E    A  +E  M W    TA
Sbjct: 17  DTDMHFLRTWAVRRCQHTDWDICERIRLGELKEARDRAAQMEKTMRWWSSCTA 69


>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 66  LDTDLTVVEPWSISKYSHTDLPRLREGMVGAQYIEDIMMWHLK---NTALSNFRKNATV 121
           LD DLTV     + K  H  L   RE  +G +  ++++  H+K    T + +  KN  +
Sbjct: 147 LDKDLTVKVEGVVGKMMHLLLCNNREEGLGVRVNDELVDKHVKILMTTTIDDIAKNVNL 205


>AF040653-1|ABC48248.1|  312|Caenorhabditis elegans Hypothetical
           protein K05F6.5 protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 24  SYDRERLEIAKQILKEVPLID 44
           S+D ERL++ K  L ++P+ D
Sbjct: 126 SFDVERLQLVKDSLNKIPIFD 146


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.322    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,571,337
Number of Sequences: 27539
Number of extensions: 95128
Number of successful extensions: 222
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 217
Number of HSP's gapped (non-prelim): 12
length of query: 122
length of database: 12,573,161
effective HSP length: 73
effective length of query: 49
effective length of database: 10,562,814
effective search space: 517577886
effective search space used: 517577886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)