Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002049-TA|BGIBMGA002049-PA|undefined
(137 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 31 0.25
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646 31 0.25
04_03_0822 - 20054832-20055179,20056794-20056847,20057561-200576... 30 0.57
03_06_0191 - 32228642-32228949,32229028-32230567 30 0.57
01_06_0950 - 33265653-33265802,33265905-33265961,33266046-332661... 29 1.0
01_07_0022 - 40543912-40544004,40545060-40545229,40545850-405459... 28 2.3
07_03_1138 - 24240155-24240219,24240427-24240559,24240640-242411... 28 3.1
06_01_0362 - 2587112-2587774 28 3.1
03_02_0001 + 4844009-4844046,4845155-4845410,4845560-4845704,484... 28 3.1
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 27 4.0
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 27 5.3
05_01_0466 + 3702771-3703016,3703133-3703196,3703757-3704055,370... 27 5.3
02_05_1128 + 34314866-34315294,34315365-34315440,34315548-343156... 27 5.3
01_06_0695 - 31292622-31293317 27 5.3
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 27 7.1
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 27 7.1
05_04_0251 - 19381397-19381904,19382003-19382157,19382897-193830... 27 7.1
02_02_0489 + 10869482-10871218 27 7.1
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 27 7.1
01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611... 26 9.3
>10_05_0011 -
7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 44 KPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTADF 101
+P + QSSHS PAS + ++ + PG A ++ A +R+ QS +TA F
Sbjct: 133 RPMGSVNNKVNQSSHSLPASM-SKGSGNQYSQFPGFPANSHNAMARAGSDQSDMTARF 189
>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
Length = 378
Score = 31.5 bits (68), Expect = 0.25
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 10 QDKAHIYKFRTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDH 69
Q++ + + R T P R +S + + S + ++ HR+S S+ A + +DH
Sbjct: 162 QERISVEETRLKTTTPGHRRRLSDSADSNYERSPRIVEM-DTCHRRSRSSRIAIRHSRDH 220
Query: 70 RSR-LTALPGPTARTYTASSRSIQAQSRLTADFEQH 104
S LT P P A +S SI+ RL+ QH
Sbjct: 221 SSDCLTPAPMPPAPLSCSSPISIKQPPRLSIQRSQH 256
>04_03_0822 -
20054832-20055179,20056794-20056847,20057561-20057657,
20057752-20057780
Length = 175
Score = 30.3 bits (65), Expect = 0.57
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 8/42 (19%)
Query: 53 HRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQ 94
HR SSH P+S P TA P A ++SSR++ AQ
Sbjct: 142 HRSSSHGHPSSSP--------TAAAAPAAAVQSSSSRTVAAQ 175
>03_06_0191 - 32228642-32228949,32229028-32230567
Length = 615
Score = 30.3 bits (65), Expect = 0.57
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 34 ARWKIFPPSFKPSKLIKASHRQSSH-SKPASQPQQDHRSRLTALPGPTARTYTASSRSIQ 92
+R+ + PP ++ I S H + P S PQ H + L +L P+ + A+ RSI
Sbjct: 8 SRFLLLPPRLAAARGISGQPPPSPHAAAPTSTPQAFH-AHLASLAAPSRAAHPATLRSIL 66
Query: 93 A 93
A
Sbjct: 67 A 67
>01_06_0950 -
33265653-33265802,33265905-33265961,33266046-33266111,
33266252-33266317,33266752-33267217,33267313-33267566
Length = 352
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 56 SSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSI 91
S +K A QP+ D RSR L P A TYT +S ++
Sbjct: 305 SESTKDAEQPKPDLRSRGLCLV-PVASTYTVASETV 339
>01_07_0022 -
40543912-40544004,40545060-40545229,40545850-40545971,
40549272-40550909,40553212-40553720
Length = 843
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQ 67
P V W + PP +P+ +++ +RQ+S S QQ
Sbjct: 223 PEVRNHFEIRTWTVLPPKCRPADVLRDIYRQASSQLRRSPSQQ 265
>07_03_1138 -
24240155-24240219,24240427-24240559,24240640-24241182,
24241306-24241411,24241630-24241727,24242289-24242516,
24242990-24243307,24243411-24243695,24243706-24243771,
24244337-24244738
Length = 747
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 41 PSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRS 90
P + P+K + A R+ SH + AS+ SR + L T T + ++
Sbjct: 448 PKYAPNKEMDAKLREDSHRRKASRGHGPEASRKSRLSRAARETTTVNKQT 497
>06_01_0362 - 2587112-2587774
Length = 220
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 48 LIKASHRQSSHSKPASQPQQ--DHRSRLTALPGPTARTYTASS 88
L S R+SS+S+P S+ H+S + A P TA T ASS
Sbjct: 174 LAAGSFRRSSYSRPMSRSISLAVHQSHVDAPPATTAATAGASS 216
>03_02_0001 +
4844009-4844046,4845155-4845410,4845560-4845704,
4845747-4845931,4847011-4847268,4847395-4847476,
4847562-4847641
Length = 347
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 66 QQDHRSRLTALPGPTARTYTASSRSIQAQSRLTADFEQHWR 106
Q D+R L L P R+YT + + + + F+Q W+
Sbjct: 121 QADYRHGLCQLGSPAERSYTVQATAASSDRCVLHVFDQKWK 161
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 27.5 bits (58), Expect = 4.0
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 51 ASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTA 99
AS RQS+H+ A P+Q PG T +SR+ Q SRL A
Sbjct: 103 ASRRQSTHAPTAPSPRQ---------PGRLPAHLTVASRAAQPASRLRA 142
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 36 WKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDH 69
WK P K + AS+ + S+S PQQD+
Sbjct: 326 WKNLPRKIKKKAVTTASNLEQSYSCTVQVPQQDN 359
>05_01_0466 +
3702771-3703016,3703133-3703196,3703757-3704055,
3704666-3704881,3705216-3705422,3705697-3705789,
3706098-3706196,3706300-3706329,3706885-3706938,
3707533-3707586,3707658-3707735,3707927-3708018,
3708093-3708150,3708248-3708322,3708930-3708977,
3709131-3709228,3709446-3709521,3709659-3709721,
3709810-3709901,3710207-3710275,3710410-3710473,
3710545-3710610,3710700-3710777
Length = 772
Score = 27.1 bits (57), Expect = 5.3
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 34 ARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLT------ALPGPTART--YT 85
A W++F +F+PSK ++ S + PA + L +P P+A T Y
Sbjct: 172 ASWRVFKENFQPSK-VRGIPDVSINVAPAHGTEDTSTESLELDLEHYVIPTPSAATSEYA 230
Query: 86 ASSRSIQAQSRLT-ADFEQHWRQSRSIQAQFRLTANFEQH 124
A+ + A T A + S IQ+ TA+FE H
Sbjct: 231 ANLAANPASLIQTGALWTNDMLLSDGIQSPSSATADFEDH 270
>02_05_1128 +
34314866-34315294,34315365-34315440,34315548-34315631,
34315729-34315784,34316302-34316358,34316459-34316508,
34316587-34316739,34316842-34316992,34317469-34317633
Length = 406
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 81 ARTYTASSRSIQAQSRLT 98
AR YT SSR I+ QSR+T
Sbjct: 130 ARKYTTSSRIIEIQSRIT 147
>01_06_0695 - 31292622-31293317
Length = 231
Score = 27.1 bits (57), Expect = 5.3
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 31 MSPARWKIFP-PSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSR 89
M P+ ++ P P P+ ++ SS S S P HR+ L P P RT +
Sbjct: 1 MEPSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPH--HRAPLPPSPRPVPRTIETTPF 58
Query: 90 SIQAQSRLTADFEQ 103
TA F+Q
Sbjct: 59 PTTFVQADTASFKQ 72
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 20 TTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQP-QQDHRSRLTALP 77
T ++ P + P PP + L + ++ +HS+P QP D+ S + P
Sbjct: 2582 TASYTPPAAVEIDPEFLAALPPEIQAEVLAQQRAQRIAHSQPIGQPVDMDNASIIATFP 2640
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 50 KASHRQSSHSKPASQPQQD 68
K SH + SHS PA +P D
Sbjct: 6 KRSHEEGSHSTPAKRPLDD 24
>05_04_0251 -
19381397-19381904,19382003-19382157,19382897-19383012,
19383185-19383286,19384321-19384438,19384622-19384735
Length = 370
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 36 WKIFPPSFKPSKLIKASHRQSSHSKPASQP 65
W++ P S KP+ +I + HS+P +P
Sbjct: 131 WRLIPESRKPNSVIINFFDEDEHSQPYFKP 160
>02_02_0489 + 10869482-10871218
Length = 578
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 40 PPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSR-----SIQAQ 94
P S K K KA +++ ++PA + + L P P++++ A SR ++
Sbjct: 153 PSSGKSKKAAKAEAAKAAAAEPAPSTGKVSKYNLAPEPSPSSKSGKALSRWTTDDEVKIL 212
Query: 95 SRLTADFEQHWRQ 107
L A F+ H Q
Sbjct: 213 EVLVAHFKSHGTQ 225
>01_06_0929 +
33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 32 SPARWKIFPPSFKPSKLIKASHRQSSHS 59
S ARW FPP P SHR+S S
Sbjct: 47 STARWPRFPPVLGPLPRGATSHRESGIS 74
>01_06_1480 -
37660591-37660720,37660899-37660930,37661061-37661155,
37661460-37661527,37661608-37661694,37662884-37662912,
37663019-37663138,37663854-37663905,37663986-37664050,
37664174-37664536,37664637-37664711,37664803-37664940,
37665025-37665181,37665471-37665478,37665576-37665710,
37665965-37666082,37666791-37666915,37667571-37667717,
37668297-37668380,37668671-37668800,37669196-37669347,
37669678-37669857,37670660-37670731,37671104-37671295,
37671366-37671411,37671498-37671647,37671725-37671882,
37671995-37672101,37672191-37672407,37672484-37672696,
37672852-37672972,37673072-37673253,37673475-37673672,
37674770-37674967
Length = 1447
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 69 HRSRLTALPGPTARTYTASSRSIQAQSRLT 98
+RS+ TALP P R + + +QA+S L+
Sbjct: 44 NRSKSTALPFPVERCFDFRAFELQAESALS 73
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.125 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,017,314
Number of Sequences: 37544
Number of extensions: 151191
Number of successful extensions: 493
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 20
length of query: 137
length of database: 14,793,348
effective HSP length: 75
effective length of query: 62
effective length of database: 11,977,548
effective search space: 742607976
effective search space used: 742607976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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