Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002049-TA|BGIBMGA002049-PA|undefined
(137 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26513| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.063
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.063
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 32 0.15
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 31 0.34
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.59
SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.59
SB_33723| Best HMM Match : Borrelia_orfD (HMM E-Value=1.8) 29 1.0
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 29 1.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_39890| Best HMM Match : PSP (HMM E-Value=7.9) 29 1.8
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 29 1.8
SB_33455| Best HMM Match : Keratin_B2 (HMM E-Value=4.2) 29 1.8
SB_47203| Best HMM Match : SASP_gamma (HMM E-Value=5.1) 28 2.4
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 3.1
SB_35479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 27 5.5
SB_2788| Best HMM Match : PT (HMM E-Value=1.6e-13) 27 5.5
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 27 5.5
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 27 5.5
SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8) 27 5.5
SB_8286| Best HMM Match : AT_hook (HMM E-Value=0.98) 27 5.5
SB_4624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 27 7.3
SB_19728| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_46613| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 26 9.6
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 26 9.6
SB_9202| Best HMM Match : ig (HMM E-Value=5e-40) 26 9.6
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
SB_47853| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
>SB_26513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1460
Score = 33.5 bits (73), Expect = 0.063
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
Query: 13 AHIYKFRT-TTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRS 71
AH T TTF + + A +P I PPSF S + + + A+ Q+
Sbjct: 851 AHATDITTYTTFSAAAHVASTPFHGGIDPPSFSVSSIQPPAMAEHEDEPSAAVNGQEFAC 910
Query: 72 RLTALPGP----TARTYTASSRSIQAQSRLTADFEQHWRQSRSIQAQFRLTANFEQHWHL 127
+ P + Y +SS S + A ++ S+ Q L++ EQH H+
Sbjct: 911 TPGQILSPIFERSEEDYRSSSSSASSTGSSAASSHHMMSRNESVAPQGHLSSIAEQHNHV 970
Query: 128 QANLSTDND 136
+ N+
Sbjct: 971 SERSVSTNE 979
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 33.5 bits (73), Expect = 0.063
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 34 ARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQD---HRSRLTALPGPT 80
A PPSF + ++ H+ S H KPA P D R R+ A P PT
Sbjct: 221 ASLSFMPPSFSGKESVRKKHKSSPHKKPAVPPAPDLSLTRKRM-APPPPT 269
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 7 RHFQDKAHIYKFRTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASH 53
+HFQ KAH+ K R V + PA K F P KP K SH
Sbjct: 571 QHFQGKAHLGKVRVLEQASEVTQPPKPA--KPFTPHLKPPKPKPGSH 615
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 31.1 bits (67), Expect = 0.34
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 44 KPSKLIKASHRQSSHS-KPASQPQQD-HRSRLT--ALPGPTARTYTASSRSIQAQSRLTA 99
+P K + + S + KP +P+++ H+SR T P PT + Y+ S + +QS+ TA
Sbjct: 519 RPKKPTRRPRKNSPRTRKPTRRPRKNTHKSRRTRKTTPQPTTQYYSTSHDPMTSQSKKTA 578
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 31.1 bits (67), Expect = 0.34
Identities = 18/72 (25%), Positives = 32/72 (44%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
PS++ ++ PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 35 PSIHPSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 94
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 95 PASQPASQPASQ 106
Score = 30.3 bits (65), Expect = 0.59
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
PS++ ++ P+ PS PS + S+PASQP S+ + P +
Sbjct: 19 PSIHPSIQPSIQPSIHPSIHPSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 78
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 79 PASQPASQPASQ 90
Score = 30.3 bits (65), Expect = 0.59
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
PS+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 39 PSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 98
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 99 PASQPASQPASQ 110
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
PS+ ++ P+ PS +P+ + S+PASQP S+ + P +
Sbjct: 23 PSIQPSIQPSIHPSIHPSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 82
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 83 PASQPASQPASQ 94
Score = 28.7 bits (61), Expect = 1.8
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
PS+ ++ P+ P+ +P+ + S+PASQP S+ + P +
Sbjct: 27 PSIQPSIHPSIHPSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 86
Query: 85 TASSRSIQAQSR-LTADFEQHWRQSRSIQAQFRL 117
AS + Q S+ + Q QS S Q + R+
Sbjct: 87 PASQPASQPASQPASQPASQPASQSASAQNKPRI 120
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 31.1 bits (67), Expect = 0.34
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 44 KPSKLIKASHRQSSHS-KPASQPQQD-HRSRLT--ALPGPTARTYTASSRSIQAQSRLTA 99
+P K + + S + KP +P+++ H+SR T P PT + Y+ S + +QS+ TA
Sbjct: 156 RPKKPTRRPRKNSPRTRKPTRRPRKNTHKSRRTRKTTPQPTTQYYSTSHDPMTSQSKKTA 215
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 30.3 bits (65), Expect = 0.59
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 55 QSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSR 96
QS H + S+ H + T PGPT R+ SSR IQ SR
Sbjct: 1041 QSKHDEVCSRATPQHANIDTKEPGPTGRSIDPSSR-IQEGSR 1081
>SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2123
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 31 MSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPT 80
MS RWK PP+F+ S+++ R ++ + + Q+ ++ T PG T
Sbjct: 374 MSSVRWKKLPPTFQKSRVLYPP-RYRANKDHSGRFQRSKANKQTVAPGIT 422
>SB_33723| Best HMM Match : Borrelia_orfD (HMM E-Value=1.8)
Length = 140
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 50 KASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTADFEQH----W 105
K + + + +SKP ++HRSR T + +R ++ +A+ + +H W
Sbjct: 58 KLTTKINLYSKPRFTIFKEHRSRFTLIKSRHSRITAKKLKNDKAKMQALESIRRHRHNIW 117
Query: 106 RQSRSIQAQFRLTANFEQHWH 126
+ QA R + ++H H
Sbjct: 118 KDVDIAQATMRALESIQRHRH 138
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 29.1 bits (62), Expect = 1.4
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 14 HIYKFRTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPAS-QPQQDHRSR 72
HI T T P + RA +P I PP+ P LI AS SH+ P +H +
Sbjct: 213 HITHASTPTTHPYIARASTPKASLIQPPAHAP-VLICAS---LSHTTPMRLDTVSEHAPK 268
Query: 73 L-TALPGPTARTYTASSRSI 91
+ AL GP R T ++I
Sbjct: 269 VHKALTGPRLRPITTVQQNI 288
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 1.4
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKP 61
P R F+++ RT+ + SPAR K P + S+ AS R S P
Sbjct: 648 PPRRRSPFRERRRSPPRRTSRWSSQSPDRRSPARIKSSPARSR-SRSQSASPRHSKSKSP 706
Query: 62 ASQPQQDHRSRLTALPGPTARTYTASS 88
A Q + T P P +T ++S
Sbjct: 707 ALSKVQVKTEKKTPSPPPIKKTIGSAS 733
>SB_39890| Best HMM Match : PSP (HMM E-Value=7.9)
Length = 100
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 31 MSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPT 80
M RWK PPSF+ S+++ R ++ + Q+ ++ T PG T
Sbjct: 4 MLSVRWKKLPPSFQKSRVLYPP-RYRANKDHTGRFQRSKANKQTVAPGIT 52
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 28.7 bits (61), Expect = 1.8
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 16 YKFRTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQS-SHSKPASQPQQDHRSRLT 74
Y +T+ F P+ R PA K PP P ++ + S S+SK P Q+++ +T
Sbjct: 410 YAVKTSEFNPNPLRI--PAA-KSTPPKPAPVQVQASPQMPSFSYSKEQLNPGQEYKCLIT 466
Query: 75 ALPGPTARTYTASSRSIQAQSRLTADFEQHW 105
A P ++ Y +L D E ++
Sbjct: 467 ACQSP-SKFYIQLFSMASKLEKLMMDIENYY 496
>SB_33455| Best HMM Match : Keratin_B2 (HMM E-Value=4.2)
Length = 388
Score = 28.7 bits (61), Expect = 1.8
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 20 TTTFGPSVYRAMSPARWKIFPPS--FKPS-KLIKASHRQSSHSKPASQPQQDHRSRLTAL 76
T PS RA+ P+ I P S +PS + I+ S+R S A +P +
Sbjct: 103 TRAIRPST-RAIRPSSRAIRPSSRAIRPSSRTIRPSNRAIRPSSRAIRPSSRTIRPSSCA 161
Query: 77 PGPTARTYTASSRSIQAQSRL 97
+ RT ASSR+IQ SR+
Sbjct: 162 IRHSDRTIRASSRAIQPSSRI 182
>SB_47203| Best HMM Match : SASP_gamma (HMM E-Value=5.1)
Length = 225
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 44 KPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQA-QSRLT 98
KP+K +++ S+ Q QQ ++ TAL PT Y A+ +Q+ QS LT
Sbjct: 133 KPTKCAYKANKVRLQSQLRLQSQQSALTKPTALTKPTKCAYKANKVRLQSQQSALT 188
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 59 SKP-ASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRL 97
+KP A + QQ ++ TAL PT Y A+ +Q+Q RL
Sbjct: 113 TKPTALKSQQSALTKPTALTKPTKCAYKANKVRLQSQLRL 152
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 42 SFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSR 96
S +PS ++S S HS+ + HRSR ++L + S+ +++SR
Sbjct: 250 SREPSSAEESSRTSSPHSRKKKSRKHRHRSRSSSLSSRRRSKHKRKSKRDRSRSR 304
>SB_35479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 40 PPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTA 99
P FK S I A H S ++ +S P + L T R +A SR + L+
Sbjct: 13 PEQFKASSDITAIHVDSIVAQSSSMPANEQLEELKR-DINTQRRASAKSRRDRIDESLSP 71
Query: 100 DFEQHWRQSRSIQAQFRLTANFEQHW 125
D +Q+R +A L A + W
Sbjct: 72 DLLHAVQQTRDKEASSWLNATPIEVW 97
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 37 KIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPG-PTARTYTASSRSIQAQS 95
K+F SF ++ +K H + P+SQ Q H A+ G Y ++RS + S
Sbjct: 306 KVFGHSFDRARHVKKFHSDAKPVTPSSQSDQSHELS-EAIEGIQNKDVYQITTRSHDSGS 364
Query: 96 RLTADFEQHWRQSRS 110
+ EQ +++S
Sbjct: 365 NSIGEREQGVLETQS 379
>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 50 KASHRQSSHSK--PASQPQQDHRSRLTALP 77
KA+ Q HSK P Q +HR+R +LP
Sbjct: 179 KAAENQQRHSKHAPEESDQSEHRARKDSLP 208
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 33 PARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRS 90
P +W+ PP F+ + R S S P + + RSR + P R ++SS S
Sbjct: 1255 PQQWRRSPPRFRGGGGFRPMRRSRSGSPPPRRRRSPSRSR-SRSPARRRRYSSSSSDS 1311
>SB_2788| Best HMM Match : PT (HMM E-Value=1.6e-13)
Length = 137
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 17 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 76
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 77 PASQPASQPASQ 88
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 21 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 80
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 81 PASQPASQPASQ 92
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 25 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 84
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 85 PASQPASQPASQ 96
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 29 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 88
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 89 PASQPASQPASQ 100
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 33 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 92
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 93 PASQPASQPASQ 104
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 37 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 96
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 97 PASQPASQPASQ 108
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 41 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 100
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 101 PASQPASQPASQ 112
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 45 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 104
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 105 PASQPASQPASQ 116
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 49 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 108
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 109 PASQPASQPASQ 120
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 53 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 112
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 113 PASQPASQPASQ 124
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 25 PSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
P+ A PA P+ +P+ + S+PASQP S+ + P +
Sbjct: 57 PASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 116
Query: 85 TASSRSIQAQSR 96
AS + Q S+
Sbjct: 117 PASQPASQPASQ 128
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 64 QPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTADFEQHWRQSRSIQAQFRLTANFEQ 123
Q + D +S+L L ++ + ++Q R T + E+ Q+RS+Q+Q L ++
Sbjct: 4283 QEKDDLKSKLDQLKKTLQKSEANAEEALQ---RRTDELEKLQSQTRSLQSQLELIEKEKE 4339
Query: 124 HW 125
W
Sbjct: 4340 SW 4341
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 27.1 bits (57), Expect = 5.5
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 19 RTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPG 78
RT + S R+ SPAR + + + S+ S R SH++ S+ + RSR L
Sbjct: 411 RTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRS-RSRSHTRSRSRSRIRSRSRSQELDS 469
Query: 79 PTARTYTASSRSIQAQSR 96
T R+ + R +A R
Sbjct: 470 RTLRSKKSFERRSRASHR 487
>SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8)
Length = 398
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 37 KIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSR 72
+I PPS +L +H+ + + P++ P++D R
Sbjct: 25 EILPPSIAGPRLHAFAHKPNDRATPSAPPEEDFLQR 60
>SB_8286| Best HMM Match : AT_hook (HMM E-Value=0.98)
Length = 506
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 57 SHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRL 97
+ S+P S PQQ + + PGP+A T + + + +L
Sbjct: 179 ARSRPKSTPQQSQTLQCSPSPGPSACTLSVDRQLTERVEKL 219
>SB_4624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 50 KASHRQSSHSKPASQPQQDHRSRLTALPGPTART--------YTASSRSIQAQSRLTAD- 100
+A H + H P + + A+P +AR +T + QS +
Sbjct: 50 EAQHSEEDHRDDQETPADPDDAHIEAVPRRSAREVRPSIRYGFTTPREQVYCQSAVQQQP 109
Query: 101 FEQHWRQSRSIQAQFRLTANFEQHWH 126
F+ HW S Q Q+ ++ H H
Sbjct: 110 FDPHWNPSPLHQPQYVYQPPWQFHQH 135
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 40 PPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTA 99
PPS K + + +H+ S +PAS Q R AL T+ + + + + Q RL +
Sbjct: 5 PPS-KRAHVADIAHKFSFSERPASTIPQPQAPREDALSAATSARIVSQAATDKHQDRLVS 63
Query: 100 D 100
+
Sbjct: 64 E 64
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 26.6 bits (56), Expect = 7.3
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 29 RAMSPARWKIFPPSFKPSKLIKASHRQSS--HSKPASQPQQDHRSRLTALPGPTARTYTA 86
R+ S R++ P SK + S R S +S+P+ P + RSR + +R+ +
Sbjct: 166 RSRSRDRYRERRPRKSRSKSLDRSRRSRSRSYSRPSPSPYRSRRSR-SRTRRSRSRSRRS 224
Query: 87 SSRSIQAQSRLTADFEQHWRQSRS 110
SRS + R + + R+ RS
Sbjct: 225 RSRSRDRRPRRRSRDRERSRERRS 248
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1 MPESRLRHFQDKAHIYKFRTTTFGPSVYRAMSP 33
MPES + HF + H + F+ S + A+ P
Sbjct: 1893 MPESGIHHFAETGHKFHFQELQISGSAHVAIWP 1925
>SB_19728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 19 RTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHR 54
R F P ++ S + I P S K S+L +++HR
Sbjct: 39 RLVPFQPKAFKVRSQIKKAIHPNSRKASQLARSAHR 74
>SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 26.6 bits (56), Expect = 7.3
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 54 RQSSHSKPASQPQQDHRSRLTALPG---PTARTYTASSRSIQAQSRLTADFEQHWRQSRS 110
RQ++ ASQ QD ++R AL A+ AS + +Q+R A Q + ++
Sbjct: 419 RQNAQDSQASQNAQDSQARKNALDSQARQNAQDSQASQNAQDSQARQNAQDSQARQNAQD 478
Query: 111 IQAQ 114
QA+
Sbjct: 479 SQAR 482
>SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 26.6 bits (56), Expect = 7.3
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 40 PPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTA 99
P FK S I A H S ++ +S P + L T R +A SR + L+
Sbjct: 671 PEQFKASSDITAIHVDSIVAQSSSMPANEQLEELKR-DINTQRRASAKSRRDRIDESLSP 729
Query: 100 DFEQHWRQSRSIQAQFRLTA 119
D +Q+R +A L A
Sbjct: 730 DLLHAVQQTRDKEASSWLNA 749
>SB_46613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 19 RTTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHS-KPASQPQQDHRSRLTALP 77
+ T P +Y ++SP R K PP S+ + + Q++ S K S + D ++ T
Sbjct: 35 KNATASPVLYASISPKRQKKLPPINLRSESLDENDFQNNRSRKSPSLDEPDILNKPTLFK 94
Query: 78 GPTAR 82
G R
Sbjct: 95 GKDFR 99
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 26.2 bits (55), Expect = 9.6
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 20 TTTFGPSVYRAMSPARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGP 79
+ F V R+ + R + F SK ++H+ S QDH + A
Sbjct: 628 SVVFAGGVQRSKTQFRAVVRREVFASSKPGATPGAIAAHAWFTSAQLQDHLTSSLAELQE 687
Query: 80 TARTYTASSRSIQAQSR----LTADFEQHWRQSRSIQAQFRLTANFEQHW 125
T T RS+ + R +TA + + +Q +F T N E W
Sbjct: 688 TIERNTGRPRSLDSDDRVSSLITAARSSYSKLVSRLQTEFTATQNEEDLW 737
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 40 PPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSR 89
PP P K K+ R+SS S P + +Q+ +S +P + RT +S+
Sbjct: 46 PPKKSPKKSPKSPKRRSSDSGPL-KAKQEGQSPKDPIPKGSPRTPPVTSK 94
>SB_9202| Best HMM Match : ig (HMM E-Value=5e-40)
Length = 1604
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 29 RAMSPARWKIFPPSFKPSKLIKASHRQS 56
R M P + K PPS S ++ASH+ S
Sbjct: 1516 RPMKPPKGKRGPPSSTTSDSVRASHKTS 1543
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 37 KIFPP--SFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTART 83
K++PP +PS +++AS + P + Q R T LP P T
Sbjct: 31 KVYPPLECTEPSSVLQASITPKPATAPTTTTQVRSRPLPTILPAPPKHT 79
>SB_47853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 76 LPGPTARTYTASSRSIQAQSRLTADFEQHWRQSRSIQAQFRLTANFEQHWHLQ 128
LP R + ++I++ A+ + R+ R I+ RLT FE+ W+++
Sbjct: 787 LPSKLERRLSILIQNIKSPKMQKAEQKPDHRKPRRIRQFRRLTVFFEEEWNVR 839
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.125 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,692,854
Number of Sequences: 59808
Number of extensions: 173713
Number of successful extensions: 751
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 690
Number of HSP's gapped (non-prelim): 65
length of query: 137
length of database: 16,821,457
effective HSP length: 75
effective length of query: 62
effective length of database: 12,335,857
effective search space: 764823134
effective search space used: 764823134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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