GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002049-TA|BGIBMGA002049-PA|undefined
         (137 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    27   0.30 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   0.52 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   0.68 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   0.68 
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   2.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   3.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   3.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   3.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   3.6  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   4.8  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    22   6.4  
AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synth...    22   6.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   8.4  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 88   SRSIQAQSRLTADFEQHWRQSRSIQAQFRLTANFEQHWHLQA 129
            SR  +A  R+TA  +Q W   R+  A      +FE+   L+A
Sbjct: 994  SRICEAAKRITASLQQAWDDERAALAAHGNEQHFEEVADLEA 1035


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 51  ASHRQSSHSKPASQPQQDHRS 71
           +SH+Q S   P+SQ QQ  RS
Sbjct: 261 SSHQQQSQQHPSSQHQQPSRS 281



 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/48 (25%), Positives = 17/48 (35%)

Query: 53  HRQSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRSIQAQSRLTAD 100
           H+Q  H     Q  Q H S     P  +A      S  +  +  L A+
Sbjct: 254 HQQQQHPSSHQQQSQQHPSSQHQQPSRSASIDLMQSALVDERDYLAAE 301


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 70  RSRLTALPGPTARTYTASS 88
           R+RLT L GP A + TAS+
Sbjct: 764 RNRLTTLDGPLAESLTAST 782


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 12/52 (23%), Positives = 20/52 (38%)

Query: 33  PARWKIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
           P  W + P S    +LI    +Q   +   +Q    HR + +    P  R +
Sbjct: 249 PDTWSVIPFSRSDHELIAFEVKQPDENPAGAQQHLSHRPQRSTRKNPAGRQH 300


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 49  IKASHRQSSHSKPASQPQQDHRSRLTALPGPT 80
           I A  +Q  H     QPQQ H+ +  + P  T
Sbjct: 302 ILAQQQQQQHHHHQHQPQQQHQQQYHSHPHHT 333


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 51  ASHRQSSHSKPASQPQQ 67
           +SH+Q S   P+SQ QQ
Sbjct: 261 SSHQQQSQQHPSSQHQQ 277


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 51  ASHRQSSHSKPASQPQQ 67
           +SH+Q S   P+SQ QQ
Sbjct: 261 SSHQQQSQQHPSSQHQQ 277


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 51  ASHRQSSHSKPASQPQQ 67
           +SH+Q S   P+SQ QQ
Sbjct: 213 SSHQQQSQQHPSSQHQQ 229


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 53  HRQSSHSKPASQPQQDHRSRL-TALPGPTARTYTASSRSIQAQSRLTADFEQH 104
           H  + H+ P S    +  S   TA+P P A   TA+S +  A   L  +   H
Sbjct: 457 HDHNHHNSPMSPINFNLLSAASTAVPNPAATNATANSTTTGAGGLLDPNSNFH 509


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 20  TTTFGPSVYRAMSPARWKIFPPSFKPS 46
           T  F P+ +    P++  IFPP  K S
Sbjct: 181 TELFQPNEFVPYDPSQEPIFPPELKLS 207


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 93  AQSRLTADFEQHWRQSRSIQAQFRLTANFEQHWHLQA 129
           A S+++  F +H+ QSR + A         Q  H+ A
Sbjct: 389 ASSQISGAFREHYWQSRPLDASLDYEWTVYQSDHMFA 425


>AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synthase
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 10  QDKAHIYKFRTTTFGPSVYRAM 31
           Q+KAHIY     T    VY+ +
Sbjct: 87  QEKAHIYVCGDVTMAEHVYQTL 108


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 31  MSPARW----KIFPPSFKPSKLIKASHRQSSHSKPASQPQQDHRSRLTALPGPTARTY 84
           + P  W    +I PP+  PS+ ++    + +  +   +  ++ R R  A    TAR +
Sbjct: 441 LPPGEWDPSIRIEPPAAIPSQEVRKRPPEKNPKEEIDEELEEQRQRKEAGLSRTARLF 498


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.125    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,182
Number of Sequences: 2123
Number of extensions: 4745
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 14
length of query: 137
length of database: 516,269
effective HSP length: 58
effective length of query: 79
effective length of database: 393,135
effective search space: 31057665
effective search space used: 31057665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)