GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002048-TA|BGIBMGA002048-PA|undefined
         (61 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          22   1.9  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       21   3.2  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         21   3.2  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    21   3.2  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    20   9.9  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    20   9.9  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 25 WRGKWSPEAVVVR 37
          WRG+W  E V V+
Sbjct: 74 WRGRWRGENVAVK 86


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 25  WRGKWSPEAVVVR 37
           WRG W  E+V V+
Sbjct: 166 WRGIWHGESVAVK 178


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 25 WRGKWSPEAVVVRTGRGAQRRLAGPLLDGCACWWRSY 61
          W G WS ++   R     Q++  G   D    +W SY
Sbjct: 18 WNGPWSDKSPEWRYIPDEQKQELGLNFDHDGEFWMSY 54


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 13  KTTRAATQHIVPWRGKWSPEAVVVRTGRGAQRRL 46
           K  R AT  I  W+ +W  EA   R  R A R L
Sbjct: 867 KQERQAT--IEQWQQQWDAEADTSRHTRWAHRVL 898


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 24  PWRGKWSPEAVV 35
           P RGKW+P   V
Sbjct: 167 PNRGKWNPAEFV 178


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
          protein protein.
          Length = 299

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 6/20 (30%), Positives = 9/20 (45%)

Query: 6  DFSGDYWKTTRAATQHIVPW 25
          +   D W+   A T  + PW
Sbjct: 27 ELGSDSWQGLNAPTGKLYPW 46


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.138    0.518 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,020
Number of Sequences: 2123
Number of extensions: 1875
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 61
length of database: 516,269
effective HSP length: 40
effective length of query: 21
effective length of database: 431,349
effective search space:  9058329
effective search space used:  9058329
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)