GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002048-TA|BGIBMGA002048-PA|undefined
         (61 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-P...    27   4.1  
AE014297-3112|AAF55965.1|  189|Drosophila melanogaster CG13860-P...    27   4.1  
BT022322-1|AAY54738.1|  143|Drosophila melanogaster IP04568p pro...    26   5.4  
BT001669-1|AAN71424.1|  390|Drosophila melanogaster RE50074p pro...    26   7.1  
AE014297-4211|AAN14137.1|  370|Drosophila melanogaster CG31131-P...    26   7.1  
AE014297-4209|AAN14135.2|  379|Drosophila melanogaster CG31253-P...    26   7.1  
BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p pro...    25   9.4  
AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-P...    25   9.4  

>AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-PA
           protein.
          Length = 977

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 25  WRGKWSPEAVVVRTGRGAQRRLAGPLLDGCACWWRSY 61
           W GK+SP A ++R+   AQ  L     D     W +Y
Sbjct: 354 WSGKFSPNAELIRSQHAAQSGLTP--FDCALSQWHAY 388


>AE014297-3112|AAF55965.1|  189|Drosophila melanogaster CG13860-PA
          protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 28 KWSPEAVVVRTGRGAQRRLAGPLLDG 53
          KW    V + TG    RR+AGP   G
Sbjct: 38 KWKERHVRISTGHTLSRRMAGPSCSG 63


>BT022322-1|AAY54738.1|  143|Drosophila melanogaster IP04568p
          protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)

Query: 49 PLLDGCACWWRS 60
          PL   CACWW S
Sbjct: 6  PLDQACACWWES 17


>BT001669-1|AAN71424.1|  390|Drosophila melanogaster RE50074p
          protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query: 5  NDFSGDYWKTTRAAT 19
          N F GD+W TT  AT
Sbjct: 71 NPFDGDFWDTTTVAT 85


>AE014297-4211|AAN14137.1|  370|Drosophila melanogaster CG31131-PA
          protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query: 5  NDFSGDYWKTTRAAT 19
          N F GD+W TT  AT
Sbjct: 51 NPFDGDFWDTTTVAT 65


>AE014297-4209|AAN14135.2|  379|Drosophila melanogaster CG31253-PA
          protein.
          Length = 379

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query: 5  NDFSGDYWKTTRAAT 19
          N F GD+W TT  AT
Sbjct: 60 NPFDGDFWDTTTVAT 74


>BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 1   MPLFNDFSGDYWKTTRAATQHIVPWRGKW 29
           +P F +F G ++ TT  AT+   P  G W
Sbjct: 105 LPCFEEFKGVHYDTTDNATRFCFP-NGTW 132


>AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-PA
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 1   MPLFNDFSGDYWKTTRAATQHIVPWRGKW 29
           +P F +F G ++ TT  AT+   P  G W
Sbjct: 105 LPCFEEFKGVHYDTTDNATRFCFP-NGTW 132


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.138    0.518 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,018,144
Number of Sequences: 52641
Number of extensions: 84560
Number of successful extensions: 340
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 334
Number of HSP's gapped (non-prelim): 8
length of query: 61
length of database: 24,830,863
effective HSP length: 42
effective length of query: 19
effective length of database: 22,619,941
effective search space: 429778879
effective search space used: 429778879
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 53 (25.4 bits)