Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002047-TA|BGIBMGA002047-PA|IPR007087|Zinc finger,
C2H2-type
(234 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 81 1e-16
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 73 3e-14
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 71 1e-13
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 66 5e-12
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 61 1e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 58 1e-09
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 56 3e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 53 4e-08
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 52 1e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 51 1e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 45 1e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 40 3e-04
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 32 0.083
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 1.0
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 28 1.3
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 2.4
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 9.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 81.4 bits (192), Expect = 1e-16
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFR 212
C++ C K + + SHLK HKR HT KP+ C ++GC+ +F L RH H KP+
Sbjct: 55 CDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYA 114
Query: 213 C--RHCDRCFSRSDHLALH 229
C CD CFS+ L H
Sbjct: 115 CTWEGCDECFSKHQQLRSH 133
Score = 75.4 bits (177), Expect = 7e-15
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFR 212
C + C K Y++ S L+ H RTH+ E+P+ C + GC F R L H R HT KPF
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFS 84
Query: 213 CRH--CDRCFSRSDHLALHAKRH 233
C + CD F HL H + H
Sbjct: 85 CHYDGCDAQFYTQQHLERHIEVH 107
Score = 49.2 bits (112), Expect = 5e-07
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 172 KRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRH--CDRCFSRSDHLALH 229
K + +K + C +E C +++R L +H R H+ +PF C + C + F R HL +H
Sbjct: 14 KNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
Query: 230 AKRH 233
+ H
Sbjct: 74 KRCH 77
Score = 49.2 bits (112), Expect = 5e-07
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 153 CEFPSCDKVYTKSSHLKAH-KRTHTGEKPYKCSWEGCEWRFARSDELTRHY-RKHTGAKP 210
C + CD+ ++K L++H HT PY C+++ CE RFA +L H R H
Sbjct: 115 CTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIIS 174
Query: 211 FRCRH 215
+ C H
Sbjct: 175 YSCPH 179
Score = 44.4 bits (100), Expect = 1e-05
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 158 CDKVYTKSSHLK----AHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRK-HTGAKPFR 212
C + + ++HL+ H+ T K Y C EGC+ F RS L +H H G F
Sbjct: 209 CGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFH 268
Query: 213 CRHCDRCFSRSDHLALHAKR 232
C C F L H +R
Sbjct: 269 CDSCGTKFGYKHMLQRHLER 288
Score = 34.3 bits (75), Expect = 0.016
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 153 CEFPSCDKVYTKSSHLKAH-KRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAK 209
C C K +T+SS LK H H G + C + C +F L RH + T K
Sbjct: 238 CPMEGCKKSFTRSSALKKHISVIHEGNMAFHC--DSCGTKFGYKHMLQRHLERGTCKK 293
Score = 29.1 bits (62), Expect = 0.58
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 179 KPYKCSWEGCEWRFARSDELTRHYRKH 205
+ Y CS+ C +RF R ++ RH H
Sbjct: 347 REYSCSFPECNYRFKRLYDMHRHLNSH 373
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 73.3 bits (172), Expect = 3e-14
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFR 212
C F C+K +T++ +LK+H THT +P++CS C+ FAR + RH + HTG K F
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSI--CKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 213 CRHCDRCFSRSDHLALHAK 231
C C++ F+R D L H K
Sbjct: 630 CVTCNQRFARMDALNRHYK 648
Score = 48.8 bits (111), Expect = 7e-07
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 165 SSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSD 224
SS KA K + Y C++ GC RF R+ L H HT +PF+C C + F+R
Sbjct: 555 SSSSKA-KSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQH 613
Query: 225 HLALHAKRH 233
H + H
Sbjct: 614 DKRRHEQLH 622
Score = 44.4 bits (100), Expect = 1e-05
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 158 CDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFR 212
C K + + + H++ HTG K + C C RFAR D L RHY+ G R
Sbjct: 605 CKKSFARQHDKRRHEQLHTGIKAFACVT--CNQRFARMDALNRHYKSEVGQNCLR 657
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 71.3 bits (167), Expect = 1e-13
Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 156 PSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFR 212
P C K + + H H RTHTGEKP+ C++ GC RF+RSDELTRH R HT A R
Sbjct: 29 PLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 179 KPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRH--CDRCFSRSDHLALHAKRH 233
+PYKC C F R + TRH R HTG KP C C + FSRSD L HA+ H
Sbjct: 24 RPYKCPL--CTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 30.7 bits (66), Expect = 0.19
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHT 176
C FP C K +++S L H R HT
Sbjct: 56 CTFPGCAKRFSRSDELTRHARIHT 79
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 65.7 bits (153), Expect = 5e-12
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 154 EFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKH 205
E P C +V+ + H H R+HTGEKP++CS+ C+ RF R DEL RH R H
Sbjct: 5 ECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 49.6 bits (113), Expect = 4e-07
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 179 KPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRH--CDRCFSRSDHLALHAKRH 233
K Y+C + C+ F R + RH R HTG KPF C + C + F+R D L H + H
Sbjct: 2 KSYECPF--CKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 30.7 bits (66), Expect = 0.19
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTH 175
C +PSC K +T+ L H RTH
Sbjct: 34 CSYPSCKKRFTRRDELIRHVRTH 56
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 61.3 bits (142), Expect = 1e-10
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 163 TKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSR 222
TK+ +A++ G+ YKC ++GC F R + RH+R HT +K F C HC F+R
Sbjct: 2 TKAKKSRAYQE---GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTR 58
Query: 223 SDHLALHAKR 232
SD L H +
Sbjct: 59 SDVLNRHVNQ 68
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHY-RKH 205
C+F C K +T+ H + H R+HT K + C C F RSD L RH +KH
Sbjct: 19 CDFQGCTKSFTRKEHARRHFRSHTNSKAFIC--PHCSSSFTRSDVLNRHVNQKH 70
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFR 212
C + C+K + ++++H +TH ++PY+C + C+ F R +L RH R H +P+
Sbjct: 445 CLYNGCNKRIARKYNVESHIQTHLSDRPYRC--DLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 213 CRHCDRCFSRSDHLALHAKRH 233
C C + F+R D L H +R+
Sbjct: 503 C-ECLKRFNRLDALNRHKQRN 522
Score = 41.9 bits (94), Expect = 8e-05
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 181 YKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSDHLALHAKRH 233
Y C + GC R AR + H + H +P+RC C F R L H + H
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 56.4 bits (130), Expect = 3e-09
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRK 204
C +P C K +T+ HL+ H+RTH K + CS+ C FARSD L RH ++
Sbjct: 28 CTYPDCPKSFTRKEHLRRHERTHENVKAFSCSF--CNRAFARSDVLNRHVQQ 77
Score = 55.2 bits (127), Expect = 8e-09
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 168 LKAHKRTHT-GEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSDHL 226
LK R H G+ + C++ C F R + L RH R H K F C C+R F+RSD L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 227 ALHAKR 232
H ++
Sbjct: 72 NRHVQQ 77
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 198 LTRHYRKHTGAKP-FRCRH--CDRCFSRSDHLALHAKRH 233
L + R H P F C + C + F+R +HL H + H
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH 50
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 52.8 bits (121), Expect = 4e-08
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 156 PSCDKVYTKSSHLKAHKRT-HTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKP 210
P C K + +S HL+ H R+ HT EKP+ C C RF+R D L +H R H A P
Sbjct: 426 PECSKKFKRSEHLRRHIRSLHTSEKPFVCI---CGKRFSRRDNLRQHERLHVNASP 478
Score = 44.8 bits (101), Expect = 1e-05
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 177 GEKPYKCSWEGCEWRFARSDELTRHYRK-HTGAKPFRCRHCDRCFSRSDHLALHAKRH 233
G K + C C +F RS+ L RH R HT KPF C C + FSR D+L H + H
Sbjct: 419 GGKSFVCP--ECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLH 473
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 153 CEFPSCDK---VYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYR 203
CE+ C + V T L AH R+HTGEKP+ CS C+ F RSD L +H R
Sbjct: 75 CEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 48.4 bits (110), Expect = 9e-07
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 175 HTGEK--PYKCSWEGCEWR-FARSDE--LTRHYRKHTGAKPFRCR--HCDRCFSRSDHLA 227
H G + Y C W+ C + ++ L H R HTG KPF C CDR F+RSD LA
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 228 LHAK 231
H +
Sbjct: 125 KHMR 128
Score = 28.7 bits (61), Expect = 0.77
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRT 174
C P CD+ +T+S L H RT
Sbjct: 108 CSVPECDRSFTRSDALAKHMRT 129
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 51.2 bits (117), Expect = 1e-07
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTHTGEKPYKCSW-----EGCEWRFARSDELTRHYRK-HT 206
CE +C + + + HLK H R+HT EKP+ CS GC +F+R D L RH +K H
Sbjct: 72 CE--TCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHR 129
Query: 207 GAKPFRCR 214
+P R R
Sbjct: 130 NPQPRRRR 137
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 179 KPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRH-------CDRCFSRSDHLALHAK 231
K Y C E C FAR + L RH R HT KPF C C R FSR D L H +
Sbjct: 68 KQYVC--ETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Query: 232 R 232
+
Sbjct: 126 K 126
Score = 28.7 bits (61), Expect = 0.77
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 209 KPFRCRHCDRCFSRSDHLALHAKRH 233
K + C C R F+R +HL H + H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH 92
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 158 CDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKH 205
C + +++ S LK H +HTGE+P+ C + GC F + RH R H
Sbjct: 473 CLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 166 SHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRH--CDRCFSRS 223
SH + + Y+C+ C F+R L H HTG +PF C + C + F+
Sbjct: 453 SHTGSSSTSSAANVRYRCT--ECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVR 510
Query: 224 DHLALHAKRH 233
++ H + H
Sbjct: 511 SNMRRHQRIH 520
Score = 26.2 bits (55), Expect = 4.1
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 153 CEFPSCDKVYTKSSHLKAHKRTH 175
C++ C K + S+++ H+R H
Sbjct: 498 CDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 188 CEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSDHLALHAKR 232
C RF R + LTRH H+ A+P C +C+ R D L H +R
Sbjct: 36 CAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQR 80
Score = 35.1 bits (77), Expect = 0.009
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 158 CDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRK 204
C K +T+ +L HK H+ +P C + CE + R D L RH ++
Sbjct: 36 CAKRFTRHENLTRHKACHSKAEPIPCPY--CEIKCKRKDLLKRHIQR 80
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.9 bits (69), Expect = 0.083
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 158 CDKVYTKSSHLKAHKRT-HTGEKP-YKCSWEGCEWRFARSDELTRHYR-KH 205
C+ V++++ L H+ T H +P ++C G + F+R D L RH R KH
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 153 CEFPSCDKVYTKSSHLKAHK 172
C P+CDK Y + LK HK
Sbjct: 352 CPVPNCDKAYKNQNGLKYHK 371
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 168 LKAHKRTHTGEKPYKCSWEGC 188
LKA G Y+C WEGC
Sbjct: 987 LKAFNMLSKGYAEYRCQWEGC 1007
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 176 TGEKPY-KCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSDH 225
TG K + KC E C F DEL +H R+ K RC CD+ R H
Sbjct: 239 TGFKGHPKC--EFCNTHFYDDDELFKHCRE----KHERCYICDQVAGRPTH 283
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 174 THTGEKPYKCSWEGCEWRFARSDEL 198
TH G P K E +WRF ++L
Sbjct: 748 THLGHHPDKTPSEYIQWRFQSGEDL 772
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.132 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,381
Number of Sequences: 5004
Number of extensions: 16434
Number of successful extensions: 105
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 42
Number of HSP's gapped (non-prelim): 47
length of query: 234
length of database: 2,362,478
effective HSP length: 71
effective length of query: 163
effective length of database: 2,007,194
effective search space: 327172622
effective search space used: 327172622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 52 (25.0 bits)
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