GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002047-TA|BGIBMGA002047-PA|IPR007087|Zinc finger,
C2H2-type
         (234 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    67   4e-13
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   0.21 

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 67.3 bits (157), Expect = 4e-13
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 158 CDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCD 217
           CD    + S LK H RTHTGEKP++C    C +      +LTRH R HTG KP+ C  C 
Sbjct: 217 CDYASVELSKLKRHIRTHTGEKPFQCPH--CTYASPDKFKLTRHMRIHTGEKPYSCDVCF 274

Query: 218 RCFSRSDHLALHAKRH 233
             F++S+ L  H   H
Sbjct: 275 ARFTQSNSLKAHKMIH 290



 Score = 65.7 bits (153), Expect = 1e-12
 Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 158 CDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCD 217
           C+    K   L  H +TH+ ++P+KC    CE  F     L  H   HTG KP RC+HCD
Sbjct: 132 CNYTSNKLFLLSRHLKTHSEDRPHKCVV--CERGFKTLASLQNHVNTHTGTKPHRCKHCD 189

Query: 218 RCFSRSDHLALHAK-RH 233
            CF+ S  L  H + RH
Sbjct: 190 NCFTTSGELIRHIRYRH 206



 Score = 61.7 bits (143), Expect = 2e-11
 Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 158 CDKVYTKSSHLKAHKR-THTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHC 216
           CD  +T S  L  H R  HT E+P+KC+   C++      +L RH R HTG KPF+C HC
Sbjct: 188 CDNCFTTSGELIRHIRYRHTHERPHKCT--ECDYASVELSKLKRHIRTHTGEKPFQCPHC 245

Query: 217 DRCFSRSDHLALHAKRH 233
                    L  H + H
Sbjct: 246 TYASPDKFKLTRHMRIH 262



 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 156 PSCDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKH-TGAKP-FRC 213
           P C         L  H R HTGEKPY C  + C  RF +S+ L  H   H  G KP F+C
Sbjct: 243 PHCTYASPDKFKLTRHMRIHTGEKPYSC--DVCFARFTQSNSLKAHKMIHQVGNKPVFQC 300

Query: 214 RHCDRCFSRSDHLALHAK 231
           + C     R   L +H +
Sbjct: 301 KLCPTTCGRKTDLRIHVQ 318



 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 158 CDKVYTKSSHLKAHKRTH-TGEKP-YKCSWEGCEWRFARSDELTRHYRK-HTGAKPFRCR 214
           C   +T+S+ LKAHK  H  G KP ++C    C     R  +L  H +  HT  KP +C+
Sbjct: 273 CFARFTQSNSLKAHKMIHQVGNKPVFQCKL--CPTTCGRKTDLRIHVQNLHTADKPIKCK 330

Query: 215 HCDRCFSRSDHLALHAKRH 233
            CD  F       +HAK H
Sbjct: 331 RCDSTFPDRYSYKMHAKTH 349



 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 158 CDKVYTKSSHLKAHKRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCD 217
           CD  +      K H +TH GEK Y+C  E C +       L  H   HT  KP++C  C 
Sbjct: 332 CDSTFPDRYSYKMHAKTHEGEKCYRC--EYCPYASISMRHLESHLLLHTDQKPYKCDQCA 389

Query: 218 RCFSRSDHLALH 229
           + F +   L  H
Sbjct: 390 QTFRQKQLLKRH 401



 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 158 CDKVYTKSSHLKAH-KRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHC 216
           C     + + L+ H +  HT +KP KC  + C+  F        H + H G K +RC +C
Sbjct: 303 CPTTCGRKTDLRIHVQNLHTADKPIKC--KRCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360

Query: 217 DRCFSRSDHLALHAKRH 233
                   HL  H   H
Sbjct: 361 PYASISMRHLESHLLLH 377


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 183 CSWEGCEWRFARSDELTRHYRKHTGAKPFRCRHCDRCFSRSDHLALHAK 231
           C+   C+        +  HY  H   + F C  C   ++RSD+L  H K
Sbjct: 497 CNLHRCKLCGKVVTHIRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCK 544



 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 154 EFPSCDKVYTKSSHLKAH 171
           E P C   YT+S +L+ H
Sbjct: 525 ECPLCRATYTRSDNLRTH 542


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.132    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,873
Number of Sequences: 2123
Number of extensions: 4459
Number of successful extensions: 54
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 9
length of query: 234
length of database: 516,269
effective HSP length: 62
effective length of query: 172
effective length of database: 384,643
effective search space: 66158596
effective search space used: 66158596
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 47 (23.0 bits)