Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002046-TA|BGIBMGA002046-PA|undefined
(73 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 27 0.40
SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12 |Schiz... 25 1.2
SPCC613.09 |sen54||tRNA-splicing endonuclease subunit Sen54 |Sch... 24 2.1
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 24 2.8
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 23 3.7
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 23 4.9
SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces ... 23 6.5
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 23 6.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 22 8.6
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 22 8.6
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 22 8.6
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 26.6 bits (56), Expect = 0.40
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 2 DVLPSGNLFREL-QDVTDTGYFE-WKLSLEDYWQQPLVIALMRESRKILFSHEIYKYPKV 59
D+ P N+ R + + + G++ W S + + + + L + IL I+ + +
Sbjct: 407 DIEPPENIVRCMCNNYSAVGFWRAWHRSFNRWLIRYIYVPLGGSNHSILNLFIIFTFVAL 466
Query: 60 YHDISW 65
+HDISW
Sbjct: 467 WHDISW 472
>SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 375
Score = 25.0 bits (52), Expect = 1.2
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 30 DYWQQPLVIA-LMRESRKILFSHEIYKYPKVYHDI 63
D W +PL + + + + FSH ++ +P+VY +
Sbjct: 267 DLWFEPLYLDHIQGYAEQQAFSHMVFYHPQVYKHV 301
>SPCC613.09 |sen54||tRNA-splicing endonuclease subunit Sen54
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 384
Score = 24.2 bits (50), Expect = 2.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 42 RESRKILFSHEIYKYPKVYHDI 63
R + IL Y Y +VYHD+
Sbjct: 227 RRRQSILLHDTFYTYEEVYHDL 248
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 23.8 bits (49), Expect = 2.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 39 ALMRESRKILFSHEIYKYPKVYHDI 63
+L+ KILF Y YP + H++
Sbjct: 697 SLLNTPVKILFGRTEYTYPLIEHEV 721
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 23.4 bits (48), Expect = 3.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 36 LVIALMRESRKILFSHEIYKYPKVYHDISWWILYAKYL 73
+V+ L+ E +I + I ++ +Y D +I+ A+YL
Sbjct: 829 IVLQLIVEGNEIAIADSIGRFTIMYFDGQKFIVVARYL 866
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 23.0 bits (47), Expect = 4.9
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 25 KLSLEDYWQQPLVIALMRESRKILFSHEIYKYPKVY 60
K + EDYW+Q ++ L + F + P+ Y
Sbjct: 224 KGNFEDYWKQSIISILKEYHLTLDFLFQFVIEPQTY 259
>SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 429
Score = 22.6 bits (46), Expect = 6.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 55 KYPKVYHDISWWI 67
KYP + DI++WI
Sbjct: 340 KYPACFKDIAFWI 352
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 22.6 bits (46), Expect = 6.5
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 7 GNLFRELQDVTDTGYFEWKLSLEDYWQQPLVI-ALMRESRKILFSHEIYKYPKVYHDISW 65
G R+L T + + +LE + LV ALMR R +LF+ I Y I +
Sbjct: 232 GEKARKLNKSEKTNKYHTEWNLEHIPRLKLVTPALMRPIR-MLFTQPIVILCSTYMAIQY 290
Query: 66 WILY 69
ILY
Sbjct: 291 GILY 294
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 35 PLVIALMRESRKILFSHEIYKYPKVYHDISWWI 67
P ++A+ R K F ++Y + D+ WW+
Sbjct: 3598 PSIMAIARALSKPDFDLDMYLGIFIRDDLFWWL 3630
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 13 LQDVTDTGYFEWKLSLEDYWQQP 35
L+ VTD F WK +E + P
Sbjct: 26 LKPVTDVDMFHWKAVIEGPTETP 48
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 6 SGNLFRELQDVTDTGYFEWKLSLEDYWQQP 35
+GN Q TGY++ + + QQP
Sbjct: 644 TGNTHNPFQSQQATGYYKQPMQQQQNMQQP 673
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.141 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,261
Number of Sequences: 5004
Number of extensions: 13930
Number of successful extensions: 48
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 11
length of query: 73
length of database: 2,362,478
effective HSP length: 53
effective length of query: 20
effective length of database: 2,097,266
effective search space: 41945320
effective search space used: 41945320
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 45 (22.2 bits)
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