Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002046-TA|BGIBMGA002046-PA|undefined
(73 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0315 - 2468267-2468293,2469021-2469070,2469159-2469234,246... 27 1.4
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677... 27 1.8
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 26 3.2
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 26 4.3
10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408 25 5.6
04_03_0357 + 14852584-14853058,14853116-14855754 25 5.6
01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847 25 5.6
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 25 5.6
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 25 5.6
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 25 7.4
08_01_0466 + 4105524-4105812,4105975-4106356,4107042-4109073 25 9.8
07_03_0497 + 18777377-18777592,18777691-18778512 25 9.8
>05_01_0315 -
2468267-2468293,2469021-2469070,2469159-2469234,
2469498-2469575,2469967-2470048,2470146-2470238,
2470564-2470673,2470831-2470893,2471293-2471344,
2471421-2471545,2472681-2472794,2472917-2472961,
2473278-2473337,2474725-2474778,2474944-2474992,
2475071-2475252,2475349-2475404,2475491-2475584
Length = 469
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 24 WKLSLEDYWQQPLVIALMRESRKILFSHEIYKYPKVYHDISWWIL 68
W S + + L I L RK+L ++ + V+HD+ W ++
Sbjct: 325 WHASFNRWLVRYLYIPLGGAQRKLLSIWVVFTFVAVWHDLEWKLI 369
>02_03_0199 +
16263549-16263644,16264941-16265899,16267140-16267791,
16267895-16267981,16268253-16268381,16269990-16270036,
16271337-16271438,16272720-16272843,16272981-16273028,
16273934-16274026,16274325-16274408,16274536-16274619,
16274751-16274819,16275531-16275590,16275946-16276017,
16276957-16277064,16278162-16278238,16278391-16278474,
16278617-16278728,16278778-16278810,16278811-16278900,
16279012-16279077,16279163-16279258,16279446-16279497,
16279723-16279775,16279998-16280018
Length = 1165
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEWKLSLEDYWQQ 34
D+ + NL EL +V+ G EWK L+D+W++
Sbjct: 892 DLSFTANLETELDNVS-AGSTEWKGLLKDFWER 923
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEWKLSLEDYWQQ 34
D+ + N+ EL +V+ G EWK L+D+W++
Sbjct: 901 DLSFTANMETELDNVS-AGSTEWKGLLKDFWER 932
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 23 EWKLSLEDYWQQPLVIALMRESRKILFSHEIYKYPK 58
E K + W + +I + R+ + L HE Y+Y +
Sbjct: 638 ETKELINKAWNEADIIEVSRDELEFLLDHEYYQYKR 673
>10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408
Length = 261
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1 MDVLPSGNLFRELQDVTDTGYFEWKLSLEDYWQQPLVIALMRESRKILFSHEI 53
M+ LPSG R + + W+L Q P + ++ ES + + +H++
Sbjct: 191 MESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQGPFSLRMVSESGQTVIAHQV 243
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 1 MDVLPSGNL--FRELQDVTDTGYFEWKLSLEDYWQQPLVIALMRESRKIL 48
+D +PS +L +E D TD Y+E +L+L W +P++ ++ + +K +
Sbjct: 865 IDSIPSTSLDAIKEWLDTTDLKYYESRLNLN--W-RPILKTIIDDPQKFI 911
>01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847
Length = 943
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEW 24
D LP GNL + L + T+ W
Sbjct: 738 DYLPGGNLHKHLHECTEDNSLSW 760
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 22 FEWKLSLEDYWQQPLVIALMRESRKILFSH 51
F+W L+D Q +V AL+ +RKI H
Sbjct: 515 FKWNCCLKDRDAQRIVNALLEHARKIKEMH 544
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 8 NLFRELQDVTDTGYFEWKLSLEDYWQQ-PLVIALMRESRKILFSHEIYKYPKVYHDISWW 66
N F++LQD G + K+ ++ +Q + + MRE+ + +++ VY W
Sbjct: 378 NAFKDLQDPEKRGVIDEKIKKKEEMEQFEVELKAMREAAEWRRLQVLFRAGSVYWCWQWQ 437
Query: 67 ILYA 70
L A
Sbjct: 438 FLEA 441
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 31 YWQQPLVIALMRESRKILFSHEIYKYPKVYHDISW 65
Y Q ++A +E +LFS +I+ D+ W
Sbjct: 512 YEVQQAIVAEFKEGHSVLFSTDIFARGLDIEDVDW 546
>08_01_0466 + 4105524-4105812,4105975-4106356,4107042-4109073
Length = 900
Score = 24.6 bits (51), Expect = 9.8
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEW-KLSLEDYWQQPLVIALMRESRKILFSHEIYKYPKVY 60
D++ F + D+ D +E K +L+D +V+A R S + +YK +
Sbjct: 218 DLVEKKRCFIVVDDIWDKKSWELIKCALQDSNCGSIVVATTRISEVAMHVGHVYKMEPLS 277
Query: 61 HDISWWILYAK 71
D S +LYA+
Sbjct: 278 LDDSKKLLYAR 288
>07_03_0497 + 18777377-18777592,18777691-18778512
Length = 345
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 12 ELQDVTDTGYFEWKLSLEDYW 32
EL+D+ D +FEW + W
Sbjct: 55 ELKDILDDAFFEWNEVYKGTW 75
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.141 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,316,324
Number of Sequences: 37544
Number of extensions: 75996
Number of successful extensions: 172
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 166
Number of HSP's gapped (non-prelim): 12
length of query: 73
length of database: 14,793,348
effective HSP length: 53
effective length of query: 20
effective length of database: 12,803,516
effective search space: 256070320
effective search space used: 256070320
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 51 (24.6 bits)
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