Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002046-TA|BGIBMGA002046-PA|undefined
(73 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40820.1 68418.m04956 FAT domain-containing protein / phospha... 29 0.38
At5g37110.1 68418.m04454 hypothetical protein 27 2.0
At4g10710.1 68417.m01751 transcriptional regulator-related simil... 26 3.5
At1g16120.1 68414.m01932 wall-associated kinase, putative contai... 26 3.5
At4g33850.1 68417.m04803 glycosyl hydrolase family 10 protein si... 25 4.6
At4g25090.1 68417.m03604 respiratory burst oxidase, putative / N... 25 4.6
At3g58140.1 68416.m06483 phenylalanyl-tRNA synthetase class IIc ... 25 4.6
At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,... 25 6.1
At1g16160.1 68414.m01936 protein kinase family protein contains ... 25 6.1
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 25 6.1
At2g05080.1 68415.m00530 hypothetical protein low similarity to ... 25 8.1
At1g57600.1 68414.m06536 membrane bound O-acyl transferase (MBOA... 25 8.1
At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containi... 25 8.1
>At5g40820.1 68418.m04956 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
similar to Atr protein [Xenopus laevis] GI:11385422;
contains Pfam profiles PF00454 Phosphatidylinositol 3-
and 4-kinase, PF02259 FAT domain, PF02260 FAT C domain
Length = 2702
Score = 29.1 bits (62), Expect = 0.38
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 13 LQDVTDTGYFEWKLSLEDYWQQPLVIALMRESRKILFS---HEIYKYPKVYH 61
LQD +D F W SL D ++Q +A + K+LFS ++ +PK+ H
Sbjct: 603 LQDGSDFDIFSW--SLSDDFEQVQAVAAISMPLKVLFSGLGALLHMFPKLEH 652
>At5g37110.1 68418.m04454 hypothetical protein
Length = 1307
Score = 26.6 bits (56), Expect = 2.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1 MDVLPSGNLFRELQDVTDTGYFEWKLSLE 29
++V P F EL+ V D Y EWK + E
Sbjct: 751 LNVQPGPRCFEELRTVNDVLYKEWKDACE 779
>At4g10710.1 68417.m01751 transcriptional regulator-related similar
to chromatin-specific transcription elongation factor
FACT 140 kDa subunit (GI:5499741) [Homo sapiens]
Length = 1074
Score = 25.8 bits (54), Expect = 3.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 1 MDVLPSGNL--FRELQDVTDTGYFEWKLSLEDYWQQPL 36
+D +P+ +L +E D TD Y+E KL+L W+Q L
Sbjct: 898 VDSVPTSSLEGIKEWLDTTDIKYYESKLNLN--WRQIL 933
>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 730
Score = 25.8 bits (54), Expect = 3.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEWKLSL 28
+ +P+G+LF+ L D +D W++ L
Sbjct: 503 EYIPNGDLFKRLHDESDDYTMTWEVRL 529
>At4g33850.1 68417.m04803 glycosyl hydrolase family 10 protein
similar to tapetum specific protein GI:3885492 from [Zea
mays]
Length = 352
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 9 LFRELQDVTDTGYFEWKLSLEDYWQQPLVIALMRESRKIL 48
+ +ELQ + +GY + LE +++ P I MR + IL
Sbjct: 227 MLKELQSIRISGYIRLAIGLESHFKTP-NIPYMRSALDIL 265
>At4g25090.1 68417.m03604 respiratory burst oxidase, putative /
NADPH oxidase, putative similar to respiratory burst
oxidase protein A from Arabidopsis thaliana, gb:AF055353
[gi:3242781], protein D [gi:3242789]; contains Pfam
profile PF01794 Ferric reductase like transmembrane
component
Length = 849
Score = 25.4 bits (53), Expect = 4.6
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 21 YFEWKLSLEDYWQQPLVIALMRESRKILFSHEI--YKYPKVYHDISWWILYAK 71
Y + + + D WQ+ VIAL ILF+++ YK VY + + AK
Sbjct: 290 YCQLRFFVLDSWQRVWVIALWLTIMAILFAYKYIQYKNRAVYEVLGPCVCLAK 342
>At3g58140.1 68416.m06483 phenylalanyl-tRNA synthetase class IIc
family protein similar to phenylalanine-tRNA synthetase
[Homo sapiens] GI:3983103; contains Pfam profile
PF01409: tRNA synthetases class II core domain (F)
Length = 429
Score = 25.4 bits (53), Expect = 4.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 55 KYPKVYHDISWWI 67
KYP Y DIS+WI
Sbjct: 339 KYPPCYKDISFWI 351
>At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,
putative similar to SP|Q03460 Glutamate synthase [NADH],
chloroplast precursor (EC 1.4.1.14) (NADH- GOGAT)
{Medicago sativa}
Length = 2208
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 12 ELQDVTDTGYFEWKLSLEDYWQQPLVIALMRESRK 46
E +T+ G + W+ + E + PL IA ++E+ +
Sbjct: 928 EASALTNPGNYHWRKNGEIHLNDPLAIAKLQEAAR 962
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 25.0 bits (52), Expect = 6.1
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEWKLSL 28
+ +P+G++F+ L D +D W++ L
Sbjct: 486 EYIPNGDMFKRLHDESDDYAMTWEVRL 512
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 25.0 bits (52), Expect = 6.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 2 DVLPSGNLFRELQDVTDTGYFEWKLSL 28
+ +P+G+LF+ L D D W++ L
Sbjct: 462 EYIPNGDLFKRLHDEYDDYMMTWEVRL 488
>At2g05080.1 68415.m00530 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 1238
Score = 24.6 bits (51), Expect = 8.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1 MDVLPSGNLFRELQDVTDTGYFEWKLSLE 29
++V+P F EL+ V Y EWK + E
Sbjct: 685 LNVVPGPRSFEELKTVNGVLYKEWKDACE 713
>At1g57600.1 68414.m06536 membrane bound O-acyl transferase (MBOAT)
family protein low similarity to skinny hedgehog
[Drosophila melanogaster] GI:15420842; contains Pfam
profile PF03062: MBOAT family
Length = 533
Score = 24.6 bits (51), Expect = 8.1
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 24 WKLSLEDYWQQPLVIALMRESRKILFSHEIYKYPKVYHDISWWIL 68
W S + + + I L RK L ++ + ++HD+ W +L
Sbjct: 381 WHASFNRWLIRYMYIPLGGSRRKFLNVWVVFTFVAMWHDLEWKLL 425
>At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 606
Score = 24.6 bits (51), Expect = 8.1
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 19 TGYFEWKLSLEDYWQQPLVIALMRESR 45
+GY+ +KLS +PL+IAL++E+R
Sbjct: 179 SGYYGYKLSALSC--KPLMIALLKENR 203
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.141 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,957,266
Number of Sequences: 28952
Number of extensions: 66834
Number of successful extensions: 198
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 189
Number of HSP's gapped (non-prelim): 13
length of query: 73
length of database: 12,070,560
effective HSP length: 53
effective length of query: 20
effective length of database: 10,536,104
effective search space: 210722080
effective search space used: 210722080
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 51 (24.6 bits)
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