Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002045-TA|BGIBMGA002045-PA|IPR006759|Glycosyl
transferase, family 54
(432 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4543| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 3e-35
SB_22540| Best HMM Match : Glyco_transf_54 (HMM E-Value=0) 140 2e-33
SB_36245| Best HMM Match : Glyco_transf_54 (HMM E-Value=1.9e-31) 138 6e-33
SB_13268| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.6e-15) 105 7e-23
SB_36247| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.2e-08) 103 4e-22
SB_22382| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.3e-08) 99 8e-21
SB_49055| Best HMM Match : Glyco_transf_54 (HMM E-Value=1.4e-14) 86 5e-17
SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.79
SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7
>SB_4543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 146 bits (354), Expect = 3e-35
Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 25/324 (7%)
Query: 112 VIGIPTVKRDKQTYLFTTLTYLIKALSAEDKRSVVIVILVGE-PDVTYILKLARQIEIMF 170
VIG+PTV+R +YL TL L+ L +DK V+IV+ V + + + +A I F
Sbjct: 273 VIGLPTVQRANASYLLNTLQGLVDGLDKQDKNQVLIVVFVADLNNPQHAEDVAHNISEKF 332
Query: 171 PREISDGVIEILAPSPAYYPELEDLCPTLGDSPKRAMWRTKQNLDNIYLMAYAISKGVYY 230
P E++ G+I+++ +YYP L L GDS R WR+KQ +D +L YA S G YY
Sbjct: 333 PSELASGLIQVITAPASYYPPLTGLPLLYGDSQSRVYWRSKQCIDYAFLFGYAGSLGRYY 392
Query: 231 LMLEDDVTTKKDFLPEMKGYIKTTTEKTPHWIFIEFCQVGAIGKVFRTRDLLPFVTYSQI 290
+ LEDDV ++K + K +I T EK W+F+E G IG VF++ D + ++
Sbjct: 393 MQLEDDVISQKGYFKATKEFI-TENEK-KEWLFLEMGFAGFIGMVFKSADTRRLSVFFKM 450
Query: 291 FYSNMPIDWLLESYLADRVCSIDKKSLCPAAAKKYKRLEKKSCAESKLRVRPRYKVSLFQ 350
+Y PIDWL + + S A + + K S K +VRP
Sbjct: 451 YYWVYPIDWLFRQFATFEL--YGNPSWARHQAPMFIHIGKVS--SLKGQVRP-------- 498
Query: 351 HIGVYSSLQGKIQKVQDPQFGKVQSYFPHQNPPAQKITTTIEDYYQHSIQNAY--EGIDF 408
L G +K+ + + + H+NPPA TT + I AY E
Sbjct: 499 -------LAG-YEKIAASKTRTRKRFHSHKNPPAVLSTTMADTVDNVDINTAYHQELNSR 550
Query: 409 FWGKKPKKGDTLEFWYGRPLQIKR 432
FW K + GD++ + + L++++
Sbjct: 551 FWAKTVRIGDSITIVFNKTLKLRK 574
>SB_22540| Best HMM Match : Glyco_transf_54 (HMM E-Value=0)
Length = 352
Score = 140 bits (339), Expect = 2e-33
Identities = 69/194 (35%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
Query: 112 VIGIPTVKRDKQTYLFTTLTYLIKALSAEDKRSVVIVILVGEPDVT-YILKLARQIEIMF 170
VIG+PTV+R + +YL TL LI L DK+ V++V+ V + D + + K+++Q+ F
Sbjct: 84 VIGVPTVQRSEASYLMDTLQALIDGLDENDKKHVMVVVFVADLDNSNHAAKMSQQLSKKF 143
Query: 171 PREISDGVIEILAPSPAYYPELEDLCPTLGDSPKRAMWRTKQNLDNIYLMAYAISKGVYY 230
+E+ G+I+ + +YYP+L L DSP+R WR+KQ +D +L YA S G YY
Sbjct: 144 SKELDSGLIQAVTAPASYYPKLTGLPQLYQDSPQRVYWRSKQCVDYAFLFGYAGSLGKYY 203
Query: 231 LMLEDDVTTKKDFLPEMKGYIKTTTEKTPHWIFIEFCQVGAIGKVFRTRDLLPFVTYSQI 290
+ LEDDV +K + K +I + W+F+E G IG VF+++D + ++
Sbjct: 204 MQLEDDVIARKGYFKATKNFINRNVGR--EWLFLEMGYTGFIGMVFKSKDTRRLSVFYKM 261
Query: 291 FYSNMPIDWLLESY 304
+Y PID+L +
Sbjct: 262 YYWVWPIDFLFRHF 275
Score = 38.3 bits (85), Expect = 0.012
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 342 PRYKVSLFQHIGVYSSLQGKIQKVQDPQFGKVQ------SYFPHQNPPAQKITTTI 391
PRY F HIG SSL+G+I+K+ + Q ++ H+NPPA KI+TT+
Sbjct: 285 PRYHPPQFVHIGKVSSLKGQIRKLTSEEMLVAQIKPEQKAFHLHENPPA-KISTTM 339
>SB_36245| Best HMM Match : Glyco_transf_54 (HMM E-Value=1.9e-31)
Length = 255
Score = 138 bits (335), Expect = 6e-33
Identities = 64/163 (39%), Positives = 97/163 (59%)
Query: 77 MQLPFLVQILTHLLNDPFSLWPLYHLSGARHYMDFVIGIPTVKRDKQTYLFTTLTYLIKA 136
+ LP + ++ HL++ P SL P L R + V GIPT++R K +YL TL L+
Sbjct: 79 LNLPSIYHLMPHLMDHPDSLAPALRLGKDRVGVSLVFGIPTIRRQKSSYLLNTLASLLDG 138
Query: 137 LSAEDKRSVVIVILVGEPDVTYILKLARQIEIMFPREISDGVIEILAPSPAYYPELEDLC 196
++ +DK VIV+ + E D Y+ ++A + FP +I G+IE++AP ++YP+L++L
Sbjct: 139 MNQDDKDDTVIVVFIAETDAGYVKQIATSVSERFPADIEAGLIEVVAPHASFYPDLDNLP 198
Query: 197 PTLGDSPKRAMWRTKQNLDNIYLMAYAISKGVYYLMLEDDVTT 239
T GDS R WRTKQNLD YLM Y+ K +Y+ + V T
Sbjct: 199 LTFGDSKDRVKWRTKQNLDFCYLMMYSQKKARFYVQVSFPVAT 241
>SB_13268| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.6e-15)
Length = 642
Score = 105 bits (252), Expect = 7e-23
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 113 IGIPTVKRDKQ----TYLFTTLTYLIKALSAEDKRSVVIVILVGEPDVTYILKLARQIEI 168
IGIPTV+R + +Y+ TL LI ++ E+ + V++VI + + + ++ ++E
Sbjct: 5 IGIPTVERVYKNMSVSYIEGTLNSLISHMTEEEMKEVLLVIFLADFNPASRHRILHKLET 64
Query: 169 MFPREISDGVIEILAPSPAYYPELEDLCPTLGDSPKRAMWRTKQNLDNIYLMAYAISKGV 228
+ + I +I ++ +YP L L T D P+R WR+KQ++D ++L+ Y
Sbjct: 65 QYKKHIESNLIHVIEAPREFYPRLNGLIRTFNDKPERMFWRSKQSIDYVFLLGYCEGMSR 124
Query: 229 YYLMLEDDVTTKKDFLPEMKGYIKTTTEKTPHWIFIEFCQVGAIGKVFRTRDL 281
YY+ LEDDV ++ F+ +K I+ K W F++F G IGK FR +L
Sbjct: 125 YYMQLEDDVESEPRFIATIKRVIE--RNKQFKWTFLQFSFWGFIGKFFRNEEL 175
>SB_36247| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.2e-08)
Length = 290
Score = 103 bits (246), Expect = 4e-22
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 274 KVFRTRDLLPFVTYSQIFYSNMPIDWLLESYLADRVCSIDKKSLCPAAAKKYKRLEKKSC 333
K+FR+ DL + + +F+ + P+DWLL+ L RVC+ +K ++ C
Sbjct: 45 KLFRSTDLNKLIEFFLMFHKDKPVDWLLDHILWVRVCNPEK--------------DQAHC 90
Query: 334 AESKLRVRPRYKVSLFQHIGVYSSLQGKIQKVQDPQFGKVQSYFPHQNPPAQKITTTIED 393
K ++R R+K S FQH+G SSL+GK Q + D F K + H NP A + TT+E+
Sbjct: 91 NREKSQLRIRFKPSQFQHVGKESSLKGKRQNLIDKDFKKAPLFQAHLNPKA-NVFTTLEN 149
Query: 394 YYQHSIQNAYEGIDFFWGKKPKKGDTLEFWYGRPLQIK 431
Y Q I AY G FFW P GD + + P+ IK
Sbjct: 150 YQQFRIDRAYTGQTFFWCYPPHVGDVIRMQFDEPIDIK 187
>SB_22382| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.3e-08)
Length = 141
Score = 98.7 bits (235), Expect = 8e-21
Identities = 52/144 (36%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 90 LNDPFSLWPLYHLSGARHYMDFVIGIPTVKRDKQTYLFTTLTYLIKALSAEDKRSVVIVI 149
++ P SL P L R + V GIPT++R K +YL TL L+ ++ +DK VIV+
Sbjct: 1 MDHPDSLAPALRLGKDRVGVSLVFGIPTIRRQKSSYLLNTLASLLDGMNQDDKDDTVIVV 60
Query: 150 LVGEPDVTYILKLARQIEIMFPREISDGVIEILAPSPAYYPELEDLCPTLGDSPKRAMWR 209
+ E D Y+ ++A + FP +I G+IE++AP ++YP+L++L T GDS R +
Sbjct: 61 FIAETDAGYVKQIATSVSERFPADIEAGLIEVVAPHASFYPDLDNLPLTFGDSKDRV--K 118
Query: 210 TKQNLDNIYLMAYAISKGVYYLML 233
K + ++I +AIS GV +L++
Sbjct: 119 VKNSYEHI---QFAIS-GVEFLLI 138
>SB_49055| Best HMM Match : Glyco_transf_54 (HMM E-Value=1.4e-14)
Length = 471
Score = 86.2 bits (204), Expect = 5e-17
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 187 AYYPELEDLCPTLGDSPKRAMWRTKQNLDNIYLMAYAISKGVYYLMLEDDVTTKKDFLPE 246
++YP L + GDSP+R WR+KQ LD +L Y G YY+ +EDDVTT KD+L
Sbjct: 155 SFYPSLSKVPKLWGDSPQRVHWRSKQCLDYAFLFKYCQDLGQYYMQIEDDVTTSKDYLKR 214
Query: 247 MKGYIKTTTEKTPHWIFIEFCQVGAIGKVFRTRDLLPFVTYSQIFYSNMPIDWLLESY 304
+K I K W +EF G IG ++R DL + ++++ P+D L +
Sbjct: 215 IKETI--AMNKRRKWSILEFGARGFIGMMYRAEDLGRLSRFVKMYHWVFPVDLLYRQF 270
Score = 53.2 bits (122), Expect = 4e-07
Identities = 26/92 (28%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 343 RYKVSLFQHIGVYSSLQGKIQKVQDPQFGKVQSYFPHQNPPAQKITTTIEDYYQHSIQNA 402
RYK L +H+G +SSL G+++K++D + G ++Y NPPA+ T+ + ++ I +
Sbjct: 283 RYKPPLVRHVGAFSSLDGQVRKLEDIKPG-FRAYTDSDNPPARLTTSMLNTVHRTRITSP 341
Query: 403 YE--GIDFFWGKKPKKGDTLEFWYGRPLQIKR 432
Y+ FW + +K D + + +P ++++
Sbjct: 342 YDTRRHGIFWSRDVEKMDYVLIEFEQPARVRK 373
>SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1798
Score = 32.3 bits (70), Expect = 0.79
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 339 RVRPRYKVSLFQHIGVYSSLQGKIQKVQDPQFGKVQSYFPHQNPPAQKITTTIEDYYQHS 398
RV+ RY+V L + Y QGK+Q V + +G+VQ+ + +++ ++ Y
Sbjct: 102 RVQARYRVRLSVSMDAYR--QGKVQSVFERVYGRVQARY------RVRLSVSVHAYRHGK 153
Query: 399 IQNAYE 404
+Q+A+E
Sbjct: 154 VQSAFE 159
Score = 29.1 bits (62), Expect = 7.3
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 228 VYYLMLEDDVTTKKDFLPEMKGYIKTTTEKTPHWIFIEFCQVGAIGKVFRTRDLLPFVTY 287
VY+ ++ +D T+K L + K +E VG + VF ++
Sbjct: 23 VYFQLIGEDGETEKIQLRQGGKAEKRFERGRTDKFIVETLDVGKVQSVFERVYSRAMLSV 82
Query: 288 SQIFYSNMPIDWLLESYLADRVCSIDKKSLCPAAAKKYKRLEKKSCAESKL-RVRPRYKV 346
S Y + + E A RV + + L + Y++ + +S E RV+ RY+V
Sbjct: 83 SMHAYWQGMVQIVFERVYA-RVQARYRVRLS-VSMDAYRQGKVQSVFERVYGRVQARYRV 140
Query: 347 SLFQHIGVYSSLQGKIQKVQDPQFGKVQSYFPHQNPPAQKITTTIEDYYQHSIQNAYEGI 406
L + V++ GK+Q + +G+VQ+ + ++ ++ Y Q +Q+ +E +
Sbjct: 141 RL--SVSVHAYRHGKVQSAFERFYGRVQARY------RVCLSVSMHAYRQGKVQSVFERV 192
>SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 165 QIEIMFPREISDGVIEI-LAPSPAYYPELEDLCPTLGDSPKRAM-WRTKQNLDNIYLMAY 222
++++ +PR + D + LAP A ++E L P LGD K A+ T + +++ L
Sbjct: 798 EVDLEYPRHLHDLHNDYPLAPESAKVDKVEKLIPNLGDKSKYAIHHETLKLYESLGLKVT 857
Query: 223 AISKGVYY 230
I +G+ +
Sbjct: 858 KIHRGITF 865
>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 377 FPHQNPPAQKITTTIEDYYQHSIQNAYEGIDFF 409
+ +++P A K+TT++EDY+ H+ Y G+D F
Sbjct: 800 YGNRDPMAYKVTTSMEDYFVHT---KYTGMDPF 829
>SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1373
Score = 29.1 bits (62), Expect = 7.3
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 22/159 (13%)
Query: 112 VIGIPTVKRD---KQTYLFTTLTYLIKALSAEDKRSVVIVI-LVGEPDVTYILKLARQIE 167
V G+ ++K D T L L+ LS +R +V+V+ V + +Y L +
Sbjct: 878 VFGLESLKEDVAEDYTELVRHFHELLSTLSVSAERPLVLVLDSVDQLSPSYNAHLMNWL- 936
Query: 168 IMFPREISDGVIEILAPSPAYYPELEDLCPTLGDSPKRAMWRTKQNLDNIYLMAYAISKG 227
P+ +SD + +++ P YY + PTL +R++ T N Y+ +S+
Sbjct: 937 ---PKSLSDHIKIVISVLPGYYE----ILPTL----QRSLTDT-----NCYIEVPTLSRD 980
Query: 228 VYYLMLEDDVTTK-KDFLPEMKGYIKTTTEKTPHWIFIE 265
+ +L+ + +K + PE + + +K P +F++
Sbjct: 981 TGHEILDAWLDSKHRTLTPEQRVLVMAAFDKCPQPLFLK 1019
>SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 28.7 bits (61), Expect = 9.7
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 117 TVKRDKQTYLFTTLTYLIKALSAEDKRSVVIV-ILVGEPDV-TYILKLARQIEIMFPREI 174
T +RD+QT L T + I L +D+ VV++ + +GEP T+ R P I
Sbjct: 300 TRERDQQTQLKTQIDTFILILQLDDQILVVVITVNLGEPTTWTFCTVFDRH---RLPFRI 356
Query: 175 SDGVIEILAPSPAYYPELEDL 195
+ + I+ P P ++DL
Sbjct: 357 GE-LFSIIVEFPDSTPAIQDL 376
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,418,540
Number of Sequences: 59808
Number of extensions: 604229
Number of successful extensions: 1178
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1153
Number of HSP's gapped (non-prelim): 17
length of query: 432
length of database: 16,821,457
effective HSP length: 84
effective length of query: 348
effective length of database: 11,797,585
effective search space: 4105559580
effective search space used: 4105559580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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