GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002045-TA|BGIBMGA002045-PA|IPR006759|Glycosyl
transferase, family 54
         (432 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   7.0  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   7.0  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   9.2  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   9.2  

>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 66  LNGLQPRYIHRMQLPFLVQILTHLLNDPFSLWPLYHLS 103
           LN      + R + PFL+ I     N P    P+YH S
Sbjct: 557 LNRSGTSVVFRAEAPFLLLIRNDQTNLPLFYGPVYHPS 594


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 326 KRLEKKSCAESKLRVRPRYKVS 347
           KR+EK   +ES LRV P  K++
Sbjct: 182 KRMEKSHQSESILRVGPEKKIT 203


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 9.2
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 307 DRVCSID-KKSLCPAAAKKYKRLEKKSCAESKLRVR 341
           D V  ++ +K LC A+ + Y R EK    ++KL+ R
Sbjct: 68  DEVMGLNFQKELCLASEQIYPRPEKSDKEQTKLQER 103


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 9.2
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 307 DRVCSID-KKSLCPAAAKKYKRLEKKSCAESKLRVR 341
           D V  ++ +K LC A+ + Y R EK    ++KL+ R
Sbjct: 68  DEVMGLNFQKELCLASEQIYPRPEKSDKEQTKLQER 103


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,233
Number of Sequences: 2123
Number of extensions: 19744
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 4
length of query: 432
length of database: 516,269
effective HSP length: 66
effective length of query: 366
effective length of database: 376,151
effective search space: 137671266
effective search space used: 137671266
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)