GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002045-TA|BGIBMGA002045-PA|IPR006759|Glycosyl
transferase, family 54
         (432 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    29   0.076
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   2.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   5.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   5.0  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 0.076
 Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 8/136 (5%)

Query: 153 EPDVTYILK-LARQIEIMFPREISDGVIEILAPSPAYYPELEDLCPTLGDSPKR----AM 207
           E D TY+      +I+  FP  +SD  +E L  SP  +  +      + +   R    A 
Sbjct: 373 EYDDTYMDSGYTNEIDFSFPDSVSDYPLE-LKGSPDGFESVTSQYKNIREDDARHIPHAS 431

Query: 208 WRTKQNLDNIYLMAYAIS--KGVYYLMLEDDVTTKKDFLPEMKGYIKTTTEKTPHWIFIE 265
               +N    YL    IS  KGV ++        K + + E   ++    ++   W+F  
Sbjct: 432 VTDSENTVPRYLSPDVISALKGVRFIAQHIKNADKDNEVIEDWKFVAMVLDRLFLWVFTL 491

Query: 266 FCQVGAIGKVFRTRDL 281
            C  G +G +F+   L
Sbjct: 492 ACTAGTLGIIFQAPSL 507


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 136 ALSAEDKRSVVIVILVGEPDVTYILKLARQIE 167
           A+SAE +++V ++ L+  PD+   L L   IE
Sbjct: 452 AVSAEREKNVSLLHLIFPPDIAKRLWLGETIE 483


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 44  PYPPGYSEEAMNMIHNLTGT 63
           P+ P YS   +  +HN+ GT
Sbjct: 273 PHVPEYSSSIIMELHNIEGT 292


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 44  PYPPGYSEEAMNMIHNLTGT 63
           P+ P YS   +  +HN+ GT
Sbjct: 288 PHVPEYSSSIIMELHNIEGT 307


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.138    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,917
Number of Sequences: 429
Number of extensions: 5842
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 432
length of database: 140,377
effective HSP length: 60
effective length of query: 372
effective length of database: 114,637
effective search space: 42644964
effective search space used: 42644964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)