Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002043-TA|BGIBMGA002043-PA|IPR003018|GAF,
IPR002073|3'5'-cyclic nucleotide phosphodiesterase,
IPR003607|Metal-dependent phosphohydrolase, HD region
         (929 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   4.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   6.9  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 769 PMMDRNKPEEQPASQVGFLSQICIPCYDMLYRILPNTK 806
           P +   + +EQPA Q    +Q+ IP   ++   +PN K
Sbjct: 459 PSISSEEEQEQPADQQTPWTQVTIPELRLIASTMPNKK 496


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 153  QLAKSVATSIGVETYRVYKLFPDHP-TF----VQHFVIDH-TKLPQNQPVPSTLERSDPQ 206
            +LA  VA+  G E Y + +   D   +F    VQ    +H  KLP +  + +T   ++P+
Sbjct: 1318 KLADEVASYYGFEAYELNRYGVDKEWSFNLADVQFERDNHYLKLPASSTLKATFTPTEPK 1377

Query: 207  QVELVLEVAKKGTSKRVSRFDDPL 230
             + +V    + G  + V + DD L
Sbjct: 1378 NLWIVSFWVRIGNGEMVPKVDDML 1401


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.135    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 937,068
Number of Sequences: 2123
Number of extensions: 38811
Number of successful extensions: 65
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64
Number of HSP's gapped (non-prelim): 2
length of query: 929
length of database: 516,269
effective HSP length: 70
effective length of query: 859
effective length of database: 367,659
effective search space: 315819081
effective search space used: 315819081
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)