GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002043-TA|BGIBMGA002043-PA|IPR003018|GAF,
IPR002073|3'5'-cyclic nucleotide phosphodiesterase,
IPR003607|Metal-dependent phosphohydrolase, HD region
         (929 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    26   1.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   7.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   9.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   9.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   9.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   9.6  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 865 EIIRQESKTIIGEAQPKPVVWNDDEEFAVEQTFRSNIWKEIDGVTWIEEE 914
           E I QE K ++G+ + KP V+ND +E    +     + +    V +I  E
Sbjct: 20  EEIVQEMKDVLGDTKKKP-VYNDLQELKYMERVIKEVLRLYPSVHYISRE 68


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 676 EILGFIRHCILATDLAAFFPNLDKI 700
           + LG I +CI A  +  FF  + +I
Sbjct: 82  QTLGIISNCINAKQITIFFDKIQRI 106


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 97  ISHYLNRNKDYLETYILESVPQDVVEKWLHMKMKNNAINDI 137
           + HY   N+  L+T  ++++   V ++   MK+  +A NDI
Sbjct: 237 LEHYEVINRQTLDTADVKTLTTVVEKECYKMKVTIDAFNDI 277


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 97  ISHYLNRNKDYLETYILESVPQDVVEKWLHMKMKNNAINDI 137
           + HY   N+  L+T  ++++   V ++   MK+  +A NDI
Sbjct: 163 LEHYEVINRQTLDTADVKTLTTVVEKECYKMKVTIDAFNDI 203


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 631 SETASPLAAMYTTSTLEHHH 650
           S + SP A MY   +  HHH
Sbjct: 51  SASTSPAARMYPYVSAAHHH 70


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 631 SETASPLAAMYTTSTLEHHH 650
           S + SP A MY   +  HHH
Sbjct: 51  SASTSPAARMYPYVSAAHHH 70


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,609
Number of Sequences: 317
Number of extensions: 9255
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 6
length of query: 929
length of database: 114,650
effective HSP length: 63
effective length of query: 866
effective length of database: 94,679
effective search space: 81992014
effective search space used: 81992014
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)