Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002043-TA|BGIBMGA002043-PA|IPR003018|GAF,
IPR002073|3'5'-cyclic nucleotide phosphodiesterase,
IPR003607|Metal-dependent phosphohydrolase, HD region
(929 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 232 1e-60
SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 3e-59
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 2e-23
SB_21890| Best HMM Match : PDEase_I (HMM E-Value=2.5e-07) 107 3e-23
SB_6007| Best HMM Match : PDEase_I (HMM E-Value=0) 103 9e-22
SB_23141| Best HMM Match : GAF (HMM E-Value=0.00015) 100 6e-21
SB_18927| Best HMM Match : GAF (HMM E-Value=0.18) 98 2e-20
SB_9575| Best HMM Match : PDEase_I (HMM E-Value=0.00012) 97 4e-20
SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0) 90 7e-18
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-17
SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07) 79 2e-14
SB_44184| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 8e-12
SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36) 42 0.002
SB_43076| Best HMM Match : PDEase_I (HMM E-Value=0.0034) 42 0.002
SB_10922| Best HMM Match : UPF0203 (HMM E-Value=9.4) 33 1.4
SB_57508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.2
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.3
SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14) 31 4.3
SB_22247| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.3
SB_8958| Best HMM Match : NUMOD1 (HMM E-Value=4.8) 31 4.3
SB_29837| Best HMM Match : MobC (HMM E-Value=6.8) 31 5.6
SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076) 30 7.5
SB_38116| Best HMM Match : APC8 (HMM E-Value=3.3) 30 7.5
SB_35438| Best HMM Match : GXGXG (HMM E-Value=1.9) 30 9.9
SB_23756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.9
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 232 bits (567), Expect = 1e-60
Identities = 128/330 (38%), Positives = 188/330 (56%), Gaps = 30/330 (9%)
Query: 399 SGETMNIPDAYSDYRFNRDVDEATGYKTISILCMPIK-VEGKVIGVVQMVNKRDDKYFGD 457
+ +T+NIPDAY+D RF+ VD+ +G+ T +ILCMPIK G +IGVVQ++NK D F
Sbjct: 1223 TSKTLNIPDAYADERFDPTVDQVSGFTTKTILCMPIKNASGDIIGVVQLLNKVDGTPFNK 1282
Query: 458 DDEAAFEIFSTFFGLALHHARLYDRIMRKEQKYRVALEVLSYHNTCREYEVQAMLLDKEP 517
+DE FE F+ F G+A+H +Y+ + + K +VALE +EP
Sbjct: 1283 NDENLFEAFAIFCGMAIHSTVMYENVNKAMAKRKVALE-------------------EEP 1323
Query: 518 L----NVDFADFYLDPFRFDEFEKCKCIISMFRDL--FDMTQFDITTLTRFTLTVKKNYR 571
L ++ DF D + + K ++M DL + Q D TL RF LT+KKNYR
Sbjct: 1324 LPPITSLRLIDFAFDDMSISDDDTLKGCLAMLCDLKIVETFQIDYLTLCRFVLTIKKNYR 1383
Query: 572 TVPYHNFDHGWTVAHAMYAILKSDVKERFDYNKASSRLALFVACLCHDLDHRGYTNKYMS 631
V YHN+ H + VA MYA+LK + Y + AL VACL HDLDHRG N +
Sbjct: 1384 PVMYHNWRHAFNVAQTMYAMLKKPSIGK--YFTVIEQYALIVACLSHDLDHRGTNNSFQI 1441
Query: 632 ETASPLAAMYTTSTLEHHHFNITVTILQQDGHNIFSHISSEDYKEILGFIRHCILATDLA 691
++A+PLA +Y+TST+EHHHF+ + I+ G+ IF+ +S+++Y +I+ + I+ATDLA
Sbjct: 1442 KSATPLAQLYSTSTMEHHHFDQCIMIINSQGNEIFNTLSADEYNKIIKLLEASIIATDLA 1501
Query: 692 AFFPNLDKIRELYRSDEAQFSWDDPSHRDL 721
+F + + + W D S +DL
Sbjct: 1502 LYFQRRGDF--FKKVENRELDWSDDSSKDL 1529
Score = 109 bits (262), Expect = 1e-23
Identities = 72/182 (39%), Positives = 102/182 (56%), Gaps = 26/182 (14%)
Query: 314 DFLLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVDYRNSE---LVSTVFDLK 370
+ L+++VK I ++ + L +IL+ L+NADR SLFL LVS VFD+
Sbjct: 1009 EVLMELVKDISNDL-DVQSLCHKILQNVSILLNADRCSLFLCQGPKEGPRFLVSKVFDVN 1067
Query: 371 FEPGLDLDMEKKEIRMPINRGIAGHVALSGETMNIPDAYSDYRFNRDVDEATGYKTISIL 430
E L+ +EIR+P GI G+VA +GET+NIP+AY D RFN+++D+ TGY T SIL
Sbjct: 1068 AESKLEDVQCLEEIRIPWGTGIVGYVAETGETVNIPNAYEDARFNKEIDKKTGYTTRSIL 1127
Query: 431 CMPIK------------------VEGKVIGVVQMVNK----RDDKYFGDDDEAAFEIFST 468
CMPIK +GKVIGV Q++NK D + DD++ ++ T
Sbjct: 1128 CMPIKDHDGEVRRIRRYVNEPQGQDGKVIGVAQVINKTGKSTDSAFTIDDEQVLLDLART 1187
Query: 469 FF 470
F
Sbjct: 1188 IF 1189
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 316 LLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVD--YRNSELVSTVFDLKFEP 373
LLD+ + IFEE SL ++ +I+ Q L+ +R S+ LVD + + D +F+P
Sbjct: 1181 LLDLARTIFEEQTSLHNIVHKIMMITQSLLQCERCSVLLVDPTSKTLNIPDAYADERFDP 1240
Query: 374 GLD 376
+D
Sbjct: 1241 TVD 1243
Score = 30.7 bits (66), Expect = 5.6
Identities = 8/39 (20%), Positives = 23/39 (58%)
Query: 90 DAEEQETISHYLNRNKDYLETYILESVPQDVVEKWLHMK 128
DA ++ + +L+ + +++++Y + +V+ WLH +
Sbjct: 895 DASTEQKVESWLDEHPEFVQSYFARKANRSLVDSWLHSR 933
>SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 227 bits (555), Expect = 3e-59
Identities = 104/229 (45%), Positives = 151/229 (65%), Gaps = 7/229 (3%)
Query: 555 DITTLTRFTLTVKKNYRTVPYHNFDHGWTVAHAMYAILKSDVKERFDYNKASSRLALFVA 614
D+ T+ RF+L+V+K YR +PYHN+ H ++VAH+++ +++ D K DY K L+LF+A
Sbjct: 365 DLETIARFSLSVRKCYRDIPYHNWCHAFSVAHSLWIVIR-DNKSLTDYEK----LSLFIA 419
Query: 615 CLCHDLDHRGYTNKYMSETASPLAAMYTTSTLEHHHFNITVTILQQDGHNIFSHISSEDY 674
+CHD+DHRG N +M +PLA +YTTST+E HHF V IL+ +G N+F + +E Y
Sbjct: 420 GICHDVDHRGKNNAFMLHCKTPLANLYTTSTMEWHHFKQGVFILESEGQNVFGQLDAESY 479
Query: 675 KEILGFIRHCILATDLAAFFPNLDKIRELYRSDEAQFSWDDPSHRDLAMAISMTAADLSA 734
+ +L I+ I+ATDL FF N ++ L + F W++ HR L + MTA DL
Sbjct: 480 RRVLELIQEAIIATDLMLFFGNKKELETL--QENKAFRWEEEKHRSLIRCLLMTACDLCT 537
Query: 735 SAKPWEIQIKTVKVIFEEFYDQGDKERAAGRIPIPMMDRNKPEEQPASQ 783
SAKPW+IQ+ V +FEEFY QGD+ER G P+PMMDR+K ++ P +Q
Sbjct: 538 SAKPWDIQVVAVNKVFEEFYIQGDEERKMGLDPLPMMDRSKHDDLPENQ 586
Score = 134 bits (324), Expect = 3e-31
Identities = 78/190 (41%), Positives = 119/190 (62%), Gaps = 21/190 (11%)
Query: 253 ILYQPIITKSGKTSYVLEMWRTKDR--FKVIDEEISGHIVVWGSVALHYCKLYVDKKRER 310
+L QPII G V+E+ + F+ DEEIS I +++
Sbjct: 194 VLCQPIIQSDGTLVGVVELVKALGSMPFEKEDEEISKQIT-----------------KQK 236
Query: 311 NMSDFLLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVDYRNSELVSTVFDLK 370
+++ FLL+VV++IF+E+ ++D +I++I+ FA++LVNADR SLFL+D + EL + +FD
Sbjct: 237 DLNTFLLNVVRSIFDEVCTMDTVIEKIMAFAKKLVNADRCSLFLLDQASEELFANLFDDG 296
Query: 371 FEPGLDLDMEKKEIRMPINRGIAGHVALSGETMNIPDAYSDYRFNRDVDEATGYKTISIL 430
E G EIR P+++GIAG+VA +G +NI DAY D RFNR+VD TGY T +IL
Sbjct: 297 NEDGSFRC--GNEIRFPVSKGIAGYVACTGSILNIRDAYRDERFNREVDMKTGYTTHTIL 354
Query: 431 CMPIKVEGKV 440
C+P++ +G+V
Sbjct: 355 CVPVRCKGRV 364
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 108 bits (259), Expect = 2e-23
Identities = 57/180 (31%), Positives = 101/180 (56%), Gaps = 5/180 (2%)
Query: 625 YTNKYMSETASPLAAMYTT-STLEHHHFNITVTILQQDGHNIFSHISSEDYKEILGFIRH 683
+ +K + LA Y S LE+HH + I++QD NI ++S+E +K+I +
Sbjct: 852 FRDKLEINARTELALRYNDISPLENHHCAVAFDIMKQDKSNILQNVSAETFKKIREGMIK 911
Query: 684 CILATDLAAFFPNLDKIRELYRSDEAQFSWDDPSHRDLAMAISMTAADLSASAKPWEIQI 743
CIL+TD+A L+K +EL +S F +DD +H+ + M I + +D+S A+P ++
Sbjct: 912 CILSTDMARHSDILNKFKELLKSG---FKFDDEAHKSMLMQIMIKVSDVSNEARPMDVAE 968
Query: 744 KTVKVIFEEFYDQGDKERAAGRIPIPMMDRNKPEEQPASQVGFLSQICIPCYDMLYRILP 803
+ + +EF+ Q D E+ G P MDR+K +P++Q+GF+ + +P ++ L + P
Sbjct: 969 PWLDCLLQEFFIQSDVEKLEGLPVAPFMDRDK-VTKPSAQIGFIKFVLVPLFEALGELFP 1027
>SB_21890| Best HMM Match : PDEase_I (HMM E-Value=2.5e-07)
Length = 229
Score = 107 bits (258), Expect = 3e-23
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Query: 708 EAQFSWDDPSHRDLAMAISMTAADLSASAKPWEIQIKTVKVIFEEFYDQGDKERAA-GRI 766
E W ++R+L A+ MTA D++A KPWEIQ +++ EF+DQGD E+
Sbjct: 12 EPNVDWSADNNRELLRAMMMTACDVAAITKPWEIQRVVAEMVASEFFDQGDLEKEKLNAE 71
Query: 767 PIPMMDRNKPEEQPASQVGFLSQICIPCYDMLYRILPNTKPMYAMATKNLNRWKARADKI 826
PIPMMDR K E P+ QVGF+ IC+P Y++ Y++ P+ KP+ N W+ +K
Sbjct: 72 PIPMMDRRKKNELPSMQVGFIDFICLPIYELFYKLEPSLKPLLDGCQSNRRHWQELGEKS 131
Query: 827 LFKQ 830
+ Q
Sbjct: 132 MDDQ 135
>SB_6007| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 511
Score = 103 bits (246), Expect = 9e-22
Identities = 63/190 (33%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 609 LALFVACLCHDLDHRGYTNKYMSETASPLAAMYTT-STLEHHHFNITVTILQQDG-HNIF 666
L+L+ A HD DH G TN ++ T S A +Y S LE+HH T+L D +N
Sbjct: 208 LSLYTAAAMHDYDHPGRTNAFLVATLSHQALLYNDRSVLENHHAAAAFTLLMSDPKYNFL 267
Query: 667 SHISSEDYKEILGFIRHCILATDLAAFFPNLDKIRELYRSDEAQFSWDDPSHRDLAMAIS 726
+S ++K ILATDL F L ++ E +WD + R L +
Sbjct: 268 CELSPAEFKRFRFLAIEAILATDLKRHFDILSDFNA--KTAEGGVNWDSEADRLLTLQFC 325
Query: 727 MTAADLSASAKPWEIQIKTVKVIFEEFYDQGDKERAAGRIPIPMMDRNKPEEQPASQVGF 786
+ +D+S +K +I + I EEFY+QGD ERA G P MDR +P Q F
Sbjct: 326 IKMSDISGPSKRRDIHTLWTERIVEEFYEQGDDERARGMAVSPYMDRQQPHVAQL-QDSF 384
Query: 787 LSQICIPCYD 796
++ + P Y+
Sbjct: 385 INHLVAPLYN 394
>SB_23141| Best HMM Match : GAF (HMM E-Value=0.00015)
Length = 346
Score = 100 bits (239), Expect = 6e-21
Identities = 58/126 (46%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 314 DFLLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLV--DYRNSELVSTVFDLKF 371
D +++++ I E+ +++L +IL L NADR SLFL N LVS +FD+
Sbjct: 105 DKFMELIRDIANEL-DINRLSHKILVNVSVLTNADRGSLFLTHGSKENRVLVSKLFDVTT 163
Query: 372 EPGLD--LDMEKKEIRMPINRGIAGHVALSGETMNIPDAYSDYRFNRDVDEATGYKTISI 429
++ + E +I +P +GIAG A SGE +NI DAYSD RFNRDVD+ TGY T SI
Sbjct: 164 ASSVEESIQNEDDQIVVPFGKGIAGCAAESGEAINIKDAYSDPRFNRDVDKKTGYTTHSI 223
Query: 430 LCMPIK 435
LCMPIK
Sbjct: 224 LCMPIK 229
Score = 45.2 bits (102), Expect = 2e-04
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 458 DDEAAFEIFSTFFGLALHHARLYDRIMRKEQKYRVALEVLSYHNTCREYEVQAML 512
DD + E F+ F GL +++ +LY+ + K +VA+EVLSYH + + EV +L
Sbjct: 292 DDRFSPEAFAIFCGLGINNTKLYEEACKLLTKQKVAMEVLSYHASAQPAEVHKIL 346
Score = 38.7 bits (86), Expect = 0.021
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 314 DFLLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVD 356
+ LL + K+IFEE ++D + I+ AQ L+ +R +FL+D
Sbjct: 234 EVLLQLAKSIFEEQTNVDDCVNNIIVQAQALLQCERCMVFLID 276
>SB_18927| Best HMM Match : GAF (HMM E-Value=0.18)
Length = 234
Score = 98.3 bits (234), Expect = 2e-20
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 321 KAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVDYRNSELVSTVFDL--KFEPGLDLD 378
++IF+++VS+D +I +I+ +AQ LV+ADR SLFLVD + +EL + +FD+ E
Sbjct: 108 RSIFQDIVSMDTVIMKIMNYAQTLVDADRTSLFLVDNKTNELYARIFDIGGSLEDSRSSQ 167
Query: 379 MEKKEIRMPINRGIAGHVALSGETMNIPDAYSDYRFN 415
++ KEIR P +G+AG+VA SGET+NI DAY D RFN
Sbjct: 168 LQ-KEIRFPKTKGVAGYVATSGETLNISDAYHDDRFN 203
>SB_9575| Best HMM Match : PDEase_I (HMM E-Value=0.00012)
Length = 286
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 727 MTAADLSASAKPWEIQIKTVKVIFEEFYDQGDKERAA-GRIPIPMMDRNKPEEQPASQVG 785
MTA D++A KPWEIQ +++ EF+DQGD E+ PIPMMDR K E P+ QVG
Sbjct: 3 MTACDVAAITKPWEIQRVVAEMVASEFFDQGDLEKEKLNAEPIPMMDRRKKNELPSMQVG 62
Query: 786 FLSQICIPCYDMLYRILPNTKPMYAMATKNLNRWKARADKILFKQ 830
F+ IC+P Y++ Y++ P+ KP+ N W+ +K + Q
Sbjct: 63 FIDFICLPIYELFYKLEPSLKPLLDGCQSNRRHWQELGEKSMDDQ 107
>SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 388
Score = 90.2 bits (214), Expect = 7e-18
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 17/264 (6%)
Query: 546 RDLFDMTQFDITTLTRFTLTVKKNY-RTVPYHNFDHGWTVAHAMYAILKSDVKERFDYNK 604
RDL + + TT + V+ +Y + VP+HN H V + +L + + FD
Sbjct: 4 RDLLKIFKIKPTTFINYMTLVENHYLKDVPFHNCIHAADVTQTAHVLLSA---QAFDNVF 60
Query: 605 ASSR-LALFVACLCHDLDHRGYTNKYMSETASPLAAMYT-TSTLEHHHFNITVTILQQDG 662
L+ +A HD+DH G N ++ T S +A MY S LE+HH + +LQ +
Sbjct: 61 TDLEILSAIIASAVHDVDHPGVNNHFLVATNSEMALMYNDESVLENHHLAVAFQLLQHED 120
Query: 663 HNIFSHISSEDYKEILGFIRHCILATDLAAFFPNLDKIRELYRSDEAQFSWDD----PSH 718
+IF ++S ++ + I +LATD A L ++ + + + + ++
Sbjct: 121 CDIFENLSKQERQTARRMIIEMVLATDNAKHMSLLASLKTMVETKKVAGTGSGVLCLENY 180
Query: 719 RDLAMAISMTA----ADLSASAKPWEIQI-KTVKVIFEEFYDQGDKERAAGRIPI-PMMD 772
D A LS QI K V + EEF+ QGDKER + I PMMD
Sbjct: 181 TDRMQVYGAIAQWYGLRLSTKRTRARTQIRKWVDRLMEEFFRQGDKERDIDGMEISPMMD 240
Query: 773 RNKPEEQPASQVGFLSQICIPCYD 796
R+ + SQV F+ + P ++
Sbjct: 241 RHNASIE-KSQVVFIDFVAQPLWE 263
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 88.6 bits (210), Expect = 2e-17
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 566 VKKNY-RTVPYHNFDHGWTVAHAMYAILKSDVKERFD-YNKASSRLALFVACLCHDLDHR 623
++ NY R YHN H V HA L KER + +A +A + HD+DH
Sbjct: 185 IEANYHRKNAYHNSTHAADVLHATAVFL---AKERVKAVLEPLDEVASLIAAIVHDVDHP 241
Query: 624 GYTNKYMSETASPLAAMYT-TSTLEHHHFNITVTI-LQQDGHNIFSHISSEDYKEILGFI 681
GYTN ++ S LA +Y + LE HH + + + D NIFS++ E+++ + I
Sbjct: 242 GYTNSFLCNAGSELAILYNDIAVLESHHAALAFKLTARDDKSNIFSNLDVEEFRTVRQAI 301
Query: 682 RHCILATDLAAFFPNLDKI------RELYRSDE----------------AQFSWDDPSHR 719
++AT++ F +L K R DE + + P +R
Sbjct: 302 IDMVMATEMTRHFEHLSKFVNSINKRRSSSMDEVHSVHSGRGTPDSNTSTSTALNTPENR 361
Query: 720 DLAMAISMTAADLSASAKPWEIQIKTVKVIFEEFYDQGDKERAAG-RIPIPMMDRNKPEE 778
L + + AD++ A+P + + I EE++ Q D+E+ G + +P+ DR
Sbjct: 362 TLIKRMLIKCADIANPARPRYLCKEWAYRIAEEYFSQTDEEKRRGLPVVMPVFDR-ATCN 420
Query: 779 QPASQVGFLSQICIPCYDM--LYRILPNTKPMYAMATKNLNRWKARADKI 826
P SQV F+ YD + +P T T N + WK AD++
Sbjct: 421 VPRSQVWFIDYFVSDLYDAWDAFAYVPET---IRHLTDNYDYWKKAADEL 467
>SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07)
Length = 552
Score = 79.0 bits (186), Expect = 2e-14
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 30/185 (16%)
Query: 308 RERNMSDFLLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVDYRNSE--LVST 365
+ N +F ++V+ I ++ L L +IL L NADR SLFLV+ + LVS
Sbjct: 200 KNSNEREFFFEIVRDIANDL-DLKTLSYKILVNVGILTNADRCSLFLVEGPKGKQWLVSK 258
Query: 366 VFD-----LKFEPGLDLDMEKKEIRMPINRGIAGHVALSGETMNIPDAYSDYRFNRDVDE 420
VFD L + ++EIR+P+ G+ D RFN+DVD+
Sbjct: 259 VFDVHIGSLNVSSAKEAIDHQREIRVPLGVGL------------------DPRFNQDVDK 300
Query: 421 ATGYKTISILCMPIK---VEGKVIGVVQMVNKRDDKY-FGDDDEAAFEIFSTFFGLALHH 476
TGY T S+LC P+K E +V+GV Q++NK F +DE +++ TF G+ + +
Sbjct: 301 QTGYHTKSLLCKPVKNNEGEVRVVGVAQIINKNPGGVPFTKEDEKVCDMYLTFCGIGITN 360
Query: 477 ARLYD 481
A+L++
Sbjct: 361 AKLFE 365
>SB_44184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 727 MTAADLSASAKPWEIQIKTVKVIFEEFYDQGDKERAAGRI-PIPMMDRNKPEEQPASQVG 785
MTA DL+ KPWEIQ + V ++ EF++QG ER + P+ +MDR K +E P QV
Sbjct: 3 MTACDLNGPTKPWEIQKEVVNLVPREFFEQGAMERERYNMEPMAIMDRQKIDELPKLQVQ 62
Query: 786 FLSQICIPCYDMLYRILPNTKPMYAMATKNLNRWK 820
F +P + +L ++ +P+ A N RW+
Sbjct: 63 FFETTGLPVFKVLAKLNNKLQPLVDGAESNKRRWQ 97
>SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36)
Length = 646
Score = 42.3 bits (95), Expect = 0.002
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 658 LQQDGHNIFSHISSEDYKEILGFIRHCILATDLAAFFPNLDKIRELYRSDEAQFSWDDPS 717
L+ G HI+S D + ++ +LATD+++ F L ++ A +
Sbjct: 530 LEHTGTTNAFHINSRDVRSLM---IDTVLATDMSSHFEQLRLMKV------ALVAGSPIE 580
Query: 718 HRDLAMAISMTAADLSASAKPWEIQIKTVKVIFEEFYDQGDKERAAGRIPIPMMDRNK-- 775
+R++ + + AD+S K W I + I EEF+ QGD E G P+ DR+
Sbjct: 581 NREVVQLL-LHVADISNPTKDWTIHRQWTTKIMEEFFTQGDMEIELGLDVSPLCDRSTTL 639
Query: 776 -PEEQ 779
PE Q
Sbjct: 640 IPESQ 644
Score = 38.3 bits (85), Expect = 0.028
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 558 TLTRFTLTVKKNYR--TVPYHNFDHGWTVAHAMYAILKSDVKERFDYNKASSRLALFVAC 615
TL RF V+ Y+ + PYHN H V H ++ L+ + Y L ++
Sbjct: 468 TLDRFLQDVETGYKRHSNPYHNDCHAADVTHTVHYFLECMGVSK--YLSDLEVFGLLLSA 525
Query: 616 LCHDLDHRGYTNKY 629
+ HDL+H G TN +
Sbjct: 526 IIHDLEHTGTTNAF 539
>SB_43076| Best HMM Match : PDEase_I (HMM E-Value=0.0034)
Length = 233
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 428 SILCMPIKVEGKVIGVVQMVNKRDDKYFGDDDEAAFEIFSTFFGLALHH 476
+ILC PIK + VIGV ++ NK + K F DE F+ + G+++ H
Sbjct: 2 NILCFPIKDDDGVIGVAELCNKANGKCFTKFDEDLTRAFAIYCGISIFH 50
Score = 37.1 bits (82), Expect = 0.065
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 630 MSETA--SPLAAMYTT--STLEHHHFNITVTILQQDGHNIFSHIS 670
M ET S LAA+Y++ S +E HHF TV IL G NIF +++
Sbjct: 87 MEETVRNSTLAALYSSEGSVMERHHFAQTVCILNSSGCNIFKNLT 131
>SB_10922| Best HMM Match : UPF0203 (HMM E-Value=9.4)
Length = 400
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/92 (20%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 573 VPYHNFDHGWTVAHAMYAILKSDVKERFDYNKASSRLALFVACLCHDLDHRGYTNKYMSE 632
+P N+D+ + H Y I+ + +DY K ++ + + D++ Y N+Y+
Sbjct: 1 MPRDNYDYKKCINH--YIIITLMPRNNYDYKKCINQYIIITLMPKENYDYQKYINQYIII 58
Query: 633 TASPLAAMYTTSTLEHHHFNITVTILQQDGHN 664
T P + H+ I +T++ +D ++
Sbjct: 59 TLMPRDNYDYKKCINHY---IIITLMPKDNYD 87
>SB_57508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1215
Score = 31.5 bits (68), Expect = 3.2
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 425 KTISILCMPIKVEGK-VIGVVQMVNKRDDKYFGDDDEAAFEIFSTFFGLALHHARLYDRI 483
K +L +KV G+ ++ V+ N DD G+D + + F F + +AR YD++
Sbjct: 573 KLKDVLVTLMKVSGEEIVKVLTNDNNDDDGDDGNDSDFLTDTFDALFAILNENARKYDKL 632
Query: 484 MRKEQKYRVAL 494
+ + ++L
Sbjct: 633 VFDALVFTISL 643
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/73 (23%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 304 VDKKRERNMSDFLLDVVKAIFEEMVSLDQLIKRILEFAQRLVNADRASLFLVDYRNSELV 363
V +++ER +++ L+D + + E+ Q ++ + + QR+++A + +D N+ LV
Sbjct: 958 VREEKEREVAE-LMDKLVRVENELARERQDMQGVTQAKQRIIDAQERRIRTLDASNARLV 1016
Query: 364 STVFDLKFEPGLD 376
+T+ +K + D
Sbjct: 1017 TTLNKMKVQRDKD 1029
>SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14)
Length = 505
Score = 31.1 bits (67), Expect = 4.3
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 386 MPINRGIAGHVALSGETMNIPDAYSDYRFNRDVDEATGYKTISILCMPIKVEGKVIGVVQ 445
+P G +G ++ + D +D N DEA +S++ +PIK K+IGV
Sbjct: 148 IPEGNGPSGKAIREKRSIIVNDIENDSLMNLWKDEALKRGFLSLMSVPIKKFDKIIGVFC 207
Query: 446 MVNKRDDKYFGDD----DEAAFEI-FS-TFFGLALHHARLYDRIMRKEQKYRVALEV 496
+ + ++ +EA ++ F+ F L ++ + ++ E +Y + E+
Sbjct: 208 FYASEKNFFDAEEIALLEEATSDVAFALEIFEKELLRKKVLEELIESENRYHILTEI 264
>SB_22247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 96 TISHYLNRNKDYLETYILESVPQDVVEKWLHMKMKNNAINDILKIYKED 144
TI H N+N+ I+ SV + V E WL + + D + +Y ++
Sbjct: 476 TIVHVTNKNRPVTHATIITSVMEKVAESWLESRYPTSKEADPICLYTDN 524
>SB_8958| Best HMM Match : NUMOD1 (HMM E-Value=4.8)
Length = 174
Score = 31.1 bits (67), Expect = 4.3
Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 573 VPYHNFDHGWTVAHAMYAILKSDVKERFDYNKASSRLALFVACLCHDLDHRGYTNKYMSE 632
+P N+D+ + H Y I+ ++ +DY K + + + D++ TN Y+
Sbjct: 21 MPRDNYDYKKCINH--YIIITLMPRDNYDYKKCINHYIIITLMPRDNYDYKKCTNHYIII 78
Query: 633 TASPLAAMYTTSTLEHHHFNITVTILQQDGHN 664
T P + H+ I +T++ +D ++
Sbjct: 79 TLMPRDNYDYKKCINHY---IIITLMPRDNYD 107
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/92 (19%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 573 VPYHNFDHGWTVAHAMYAILKSDVKERFDYNKASSRLALFVACLCHDLDHRGYTNKYMSE 632
+P N+D+ H Y I+ ++ +DY K + + + D++ N+Y+S
Sbjct: 61 MPRDNYDYKKCTNH--YIIITLMPRDNYDYKKCINHYIIITLMPRDNYDYKKLINQYISI 118
Query: 633 TASPLAAMYTTSTLEHHHFNITVTILQQDGHN 664
T P +++ + I++T++ +D ++
Sbjct: 119 TLMPRDNYDYKKSIKQY---ISITLMPRDNYD 147
>SB_29837| Best HMM Match : MobC (HMM E-Value=6.8)
Length = 327
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 222 RVSRFDDPLRFPETPLSLLRSCNSRNKQGNYILYQPIITKSGKTSYVLEMWRTKDRFKVI 281
R S ++ L+F TP SRN+Q + I + P +K+ T+ E + D+
Sbjct: 254 RKSGYEYELKFQPTPQRTSTQRQSRNRQRDVIWFNPPYSKNVSTNIGREFLKLADKCFPT 313
Query: 282 DEEIS 286
D ++S
Sbjct: 314 DHKLS 318
>SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076)
Length = 255
Score = 30.3 bits (65), Expect = 7.5
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 45 IGFSGTPASLKSPTETKARFHAGCVPKQSIYMDWNSVRADKKKHSDAEEQETISHYLNRN 104
+ F T + + + + AR + ++YM VR +K +S + E I Y N
Sbjct: 36 VTFPNTNENRRKSSYSLARHSKKLILPSTVYMPKEGVRV-RKSYSREMKLEVIEWYKNNG 94
Query: 105 KDYLETYILESVPQDVVEKWLHMK 128
+ +T +P+ + +WL M+
Sbjct: 95 LNKNKTCRQFGIPRKCITQWLKME 118
>SB_38116| Best HMM Match : APC8 (HMM E-Value=3.3)
Length = 326
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 19 SSNTPIQSKTSDGRSPQLLPPIGKAE 44
SSNTP SD R Q LPPIG E
Sbjct: 43 SSNTPHSKSESDLRRYQALPPIGSQE 68
>SB_35438| Best HMM Match : GXGXG (HMM E-Value=1.9)
Length = 602
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 228 DPLRFPETPLSLLRSCNSRNKQGNYILYQPIITKSGKTSYVLEMWRTKDRFKVIDEEISG 287
D L+ + ++ N+ +KQG++ Y+P + K+ + + ++ +D K E+ G
Sbjct: 418 DKLQHTNSVTYKIKDLNNEDKQGSF--YEPELLKAKQDVFRIDKVIRRDYKKASFGEVEG 475
Query: 288 HIVVWGSVALHYCKLYVDKKRE 309
H ++ A+ YV+ K E
Sbjct: 476 HFIMQEIGAIVKKHTYVNGKGE 497
>SB_23756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 507 EVQAMLLDKEPLNVDFADFYLDPFRFDEFEKCKCIISMFRDLFD-----MTQFDITTLT 560
+ +A+L L++ F + L +DE KC+ + F++L D +T FDI LT
Sbjct: 4 KTEAILFSLPRLDITFK-YILPRLYYDELYKCRRVCKSFKELCDEYFRTLTTFDIRNLT 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,664,132
Number of Sequences: 59808
Number of extensions: 1301806
Number of successful extensions: 2996
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2924
Number of HSP's gapped (non-prelim): 57
length of query: 929
length of database: 16,821,457
effective HSP length: 89
effective length of query: 840
effective length of database: 11,498,545
effective search space: 9658777800
effective search space used: 9658777800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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