GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002040-TA|BGIBMGA002040-PA|undefined
         (382 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK091126-1|BAC03589.1|  246|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AK001338-1|BAA91634.1|  526|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AF277625-1|AAG38514.1|  460|Homo sapiens vezatin protein.              31   9.0  
AF216644-1|AAG38485.1|  569|Homo sapiens transmembrane protein v...    31   9.0  

>AK091126-1|BAC03589.1|  246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33807 fis, clone CTONG2001524. ).
          Length = 246

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 75  DDYGINDQTKIEINKLFDLH-LKPKAILAALQKIDGIKLPTKIQLNNYLSDRRRIKFGQP 133
           DDY +N++ K EINKLF+ +  K K           +       LN +   R R K    
Sbjct: 102 DDYWVNNEIKAEINKLFETNENKDKVYWNLWDTAKAVFRGKFTALNAHRRKRERSKIDTL 161

Query: 134 TILLGELEK 142
              L ELEK
Sbjct: 162 MSQLKELEK 170


>AK001338-1|BAA91634.1|  526|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10476 fis, clone NT2RP2000091. ).
          Length = 526

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 159 IMKYWILESDQPIFKFVLTQKRGLKEKIDSLFDLDFKPKVLVSDAAPAIKNAFLEVFGFD 218
           + + W+ +S +  F+ V+     L+++++ L     + + LVS+A P ++     +    
Sbjct: 176 LFQLWVAQSSE-FFRRVII----LEDELEKLVCTK-ETQELVSEAYPILEQKLKLIQPHV 229

Query: 219 TTVRMCWAHAIKNIKKKVEQTVDKKNRKDI 248
                CW  AI  + K + +  DKK + +I
Sbjct: 230 QASNNCWEEAISQVDKLLRRNTDKKGKPEI 259


>AF277625-1|AAG38514.1|  460|Homo sapiens vezatin protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 199 LVSDAAPAIKNAFLEVFGFDTTVRMCWAHAIKNIKKKVEQTVDKKNRKDI 248
           LVS+A P ++     +         CW  AI  I K + +  DKK + +I
Sbjct: 306 LVSEAYPILEQKLKLIQPHVQASNNCWEEAISQIDKLLRRNTDKKGKPEI 355


>AF216644-1|AAG38485.1|  569|Homo sapiens transmembrane protein
           vezatin protein.
          Length = 569

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 199 LVSDAAPAIKNAFLEVFGFDTTVRMCWAHAIKNIKKKVEQTVDKKNRKDI 248
           LVS+A P ++     +         CW  AI  I K + +  DKK + +I
Sbjct: 415 LVSEAYPILEQKLKLIQPHVQASNNCWEEAISQIDKLLRRNTDKKGKPEI 464


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,588,550
Number of Sequences: 224733
Number of extensions: 2097456
Number of successful extensions: 4071
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4071
Number of HSP's gapped (non-prelim): 4
length of query: 382
length of database: 73,234,838
effective HSP length: 91
effective length of query: 291
effective length of database: 52,784,135
effective search space: 15360183285
effective search space used: 15360183285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)