Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002040-TA|BGIBMGA002040-PA|undefined
(382 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 34 0.19
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 31 1.4
U37429-3|AAA79350.1| 585|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical pr... 30 2.4
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 29 5.5
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 29 5.5
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 29 5.5
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 29 5.5
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 29 5.5
AF040645-14|AAB94979.1| 779|Caenorhabditis elegans Hypothetical... 28 9.6
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 33.9 bits (74), Expect = 0.19
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 243 KNRKDIMQDIYALHDASSQEIFNAASQAFIVKH-ASKTSFIKYFEQEWLIKNPNWFLGGA 301
K KD++ D+ +D FN+ S +IV H A K F + + + + K L G+
Sbjct: 589 KRLKDMITDVKKFNDRVGSRTFNSLSDLWIVFHEAKKIGFHRELDVDAVAKK----LSGS 644
Query: 302 ATPSPTTNNALEAFNKSIKDHNTMREHF--PLSRFLTVASEMVTHWSNDINENSFPETHN 359
TP N E F +K+ ++ +F L+R L VAS M+ + + + P+
Sbjct: 645 TTP-----NGTEEFLNHLKEVGSLNLNFNMHLTRVL-VASMMMKEVNGTLEKIFNPKVEV 698
Query: 360 IELKE 364
+++++
Sbjct: 699 VKVEK 703
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Query: 236 VEQTVDKKNRKDIMQDIYALHDASSQEIFNAASQAFIVKHASKTSFIKYFEQEWLIKNPN 295
V T+DK NR I+ I A S F +F+VK + +SFI ++ L + +
Sbjct: 12 VLNTLDKSNRH-ILTCILVCGLAWSPLAFTGLCPSFVVKASENSSFIGVADEFDLTGDAS 70
Query: 296 WFLGGAATPSPTTNNALEAFNKSIKDHNTMREHFPLSRFLTVASEMVTHWSNDI 349
W T N F + DH F + L M++ +S I
Sbjct: 71 WLAESTTTFYMVGNMIGGMFIPPLADHYGRLPVFVATVLLMAVGGMISAFSTSI 124
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Query: 236 VEQTVDKKNRKDIMQDIYALHDASSQEIFNAASQAFIVKHASKTSFIKYFEQEWLIKNPN 295
V T+DK NR I+ I A S F +F+VK + +SFI ++ L + +
Sbjct: 32 VLNTLDKSNRH-ILTCILVCGLAWSPLAFTGLCPSFVVKASENSSFIGVADEFDLTGDAS 90
Query: 296 WFLGGAATPSPTTNNALEAFNKSIKDHNTMREHFPLSRFLTVASEMVTHWSNDI 349
W T N F + DH F + L M++ +S I
Sbjct: 91 WLAESTTTFYMVGNMIGGMFIPPLADHYGRLPVFVATVLLMAVGGMISAFSTSI 144
>U37429-3|AAA79350.1| 585|Caenorhabditis elegans Hypothetical
protein F09E5.10 protein.
Length = 585
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 224 CWAH----AIKNIKKKVEQTVDKKNRKDIMQDIYALHDASSQEIFNAASQAFIVK 274
CW H KN++K V ++K ++++ IY L A +I +A S+ I++
Sbjct: 512 CWRHFKVNLFKNLRKAVGDDINKPEFVNLLKSIYTLSFAPHDKISSATSKNSILE 566
>Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical
protein R09A8.3 protein.
Length = 817
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 112 LPTKIQLNNYLSDRRRIKFGQPTILLGELEKWIHDH-ENIPEDEDE 156
L +QL+N + RR+ F T L+G+++++I D+ ++I D E
Sbjct: 229 LAENLQLSNCIGIRRQANFHNDTFLMGKVDQFIVDNFDSIVNDSKE 274
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 47 YFLFECGSDCVFVYRTEADHNHNDIGARDDYGINDQTKIEINKLFDLHLKPKAILAALQ- 105
+FL E F Y ADHN + +ND++K + +L H KP+ + L
Sbjct: 8 HFLDEITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSV-QLDVSHFKPEDLKIELDG 66
Query: 106 ---KIDGIK 111
KI+GI+
Sbjct: 67 RELKIEGIQ 75
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 47 YFLFECGSDCVFVYRTEADHNHNDIGARDDYGINDQTKIEINKLFDLHLKPKAILAALQ- 105
+FL E F Y ADHN + +ND++K + +L H KP+ + L
Sbjct: 16 HFLDEITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSV-QLDVSHFKPEDLKIELDG 74
Query: 106 ---KIDGIK 111
KI+GI+
Sbjct: 75 RELKIEGIQ 83
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 47 YFLFECGSDCVFVYRTEADHNHNDIGARDDYGINDQTKIEINKLFDLHLKPKAILAALQ- 105
+FL E F Y ADHN + +ND++K + +L H KP+ + L
Sbjct: 16 HFLDEITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSV-QLDVSHFKPEDLKIELDG 74
Query: 106 ---KIDGIK 111
KI+GI+
Sbjct: 75 RELKIEGIQ 83
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 47 YFLFECGSDCVFVYRTEADHNHNDIGARDDYGINDQTKIEINKLFDLHLKPKAILAALQ- 105
+FL E F Y ADHN + +ND++K + +L H KP+ + L
Sbjct: 16 HFLDEITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSV-QLDVSHFKPEDLKIELDG 74
Query: 106 ---KIDGIK 111
KI+GI+
Sbjct: 75 RELKIEGIQ 83
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 47 YFLFECGSDCVFVYRTEADHNHNDIGARDDYGINDQTKIEINKLFDLHLKPKAILAALQ- 105
+FL E F Y ADHN + +ND++K + +L H KP+ + L
Sbjct: 16 HFLDELTGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSV-QLDVSHFKPENLKIKLDG 74
Query: 106 ---KIDGIK 111
KI+GI+
Sbjct: 75 RELKIEGIQ 83
>AF040645-14|AAB94979.1| 779|Caenorhabditis elegans Hypothetical
protein F52C6.14 protein.
Length = 779
Score = 28.3 bits (60), Expect = 9.6
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 184 EKIDSLFDLDFKPKVLVSDAAPAIKNAFLEVFGFDTTVR-MCWAHAIKNIKKKVEQ---- 238
+K+ L+ +F+P +SD A N F VF T + +C H +++ KK ++
Sbjct: 323 QKVKELYP-EFRPAFFMSDEANCFWNGFSAVFDSTHTKKVLCRWHLLRSWCKKAKELMMS 381
Query: 239 ---TVDKKNR--KDIMQDIYALHDASSQEIFNAASQAFIVKHASKTSFIKYFEQEWLIKN 293
+DK R ++++++ D I + ++ +A F YF + +
Sbjct: 382 DKDLLDKTTRALRELIRE--PRQDRLIHRILSLLTELDESGNAKAKQFSDYFMKYQYNRI 439
Query: 294 PNWFLGGAATPSPTTNNALEAFNKSIKDHNTMREHFPLSRFLTV---ASEMVTH 344
W A + T+ E+++ +K + + + V S+MV H
Sbjct: 440 GQWSTTSRANIACHTSMFAESWHSVLKGQMGKKRRIRCDKLIAVLLSTSDMVAH 493
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,620,677
Number of Sequences: 27539
Number of extensions: 420561
Number of successful extensions: 1090
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1089
Number of HSP's gapped (non-prelim): 11
length of query: 382
length of database: 12,573,161
effective HSP length: 83
effective length of query: 299
effective length of database: 10,287,424
effective search space: 3075939776
effective search space used: 3075939776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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