GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002040-TA|BGIBMGA002040-PA|undefined
         (382 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               24   1.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   5.8  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    22   7.6  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   7.6  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   7.6  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/32 (31%), Positives = 21/32 (65%)

Query: 226 AHAIKNIKKKVEQTVDKKNRKDIMQDIYALHD 257
           +H I+N + ++++ V+  NRK+I  D+  L +
Sbjct: 86  SHIIQNDEIQLDKLVEMANRKNISIDVKMLSE 117


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 348 DINENSFPETHNIELKEWTKG 368
           D N +S PE   + +  W KG
Sbjct: 326 DANSSSTPEQFKVIIDNWIKG 346


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 16/55 (29%), Positives = 22/55 (40%)

Query: 315 FNKSIKDHNTMREHFPLSRFLTVASEMVTHWSNDINENSFPETHNIELKEWTKGY 369
           F   I  +   REH  L+  L V   +V     D  E  + ET   E+K+    Y
Sbjct: 50  FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 104


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 16/55 (29%), Positives = 22/55 (40%)

Query: 315 FNKSIKDHNTMREHFPLSRFLTVASEMVTHWSNDINENSFPETHNIELKEWTKGY 369
           F   I  +   REH  L+  L V   +V     D  E  + ET   E+K+    Y
Sbjct: 66  FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 16/55 (29%), Positives = 22/55 (40%)

Query: 315 FNKSIKDHNTMREHFPLSRFLTVASEMVTHWSNDINENSFPETHNIELKEWTKGY 369
           F   I  +   REH  L+  L V   +V     D  E  + ET   E+K+    Y
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 177


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,736
Number of Sequences: 429
Number of extensions: 4793
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 382
length of database: 140,377
effective HSP length: 59
effective length of query: 323
effective length of database: 115,066
effective search space: 37166318
effective search space used: 37166318
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)