Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002039-TA|BGIBMGA002039-PA|IPR000744|NSF attachment
protein
(363 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1169 - 31446291-31446395,31446789-31446918,31447047-314471... 76 5e-14
08_01_1083 + 11096520-11096664,11097543-11097592,11097682-110977... 46 6e-05
10_08_0534 + 18595520-18595828,18595917-18597149 33 0.47
10_08_0533 + 18592177-18592581,18592674-18593906 33 0.47
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 33 0.47
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 32 0.83
03_05_0958 - 29200048-29200731 30 2.5
04_03_0014 + 9404174-9404377,9404508-9404708,9404796-9404862,940... 30 3.3
02_04_0196 + 20835495-20837255 29 4.4
02_05_1248 - 35237036-35237252,35237843-35239491 29 5.8
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 29 7.7
01_03_0307 + 14879564-14879594,14880024-14880182,14880629-14881857 29 7.7
>04_04_1169 -
31446291-31446395,31446789-31446918,31447047-31447126,
31447396-31447474,31448178-31448315,31448386-31448522
Length = 222
Score = 75.8 bits (178), Expect = 5e-14
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
Query: 103 LEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLY 162
+E A + KEL +E+ + AS Y++ G A+ L K LE +TP A+K+Y
Sbjct: 1 MESAGALAKELGRWNEVSDFYRRASEFYRECGRAQPASDALAKGASFLEDNTPDEAIKMY 60
Query: 163 QHAADISANESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLC 222
A I + + + A+ L V+LE+Y +A R + N + + +
Sbjct: 61 DEACSILEEDGKEQMAFDLYRAAASLYVKLEKYSDAAATFLRLGSAADKCNAINSQCKGY 120
Query: 223 VAIVLVQLARGDTVAAEKSY---KEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSP 279
++ +++ L D A+K Y E + + +LL AY+E D + ++A +S
Sbjct: 121 LSAIIIYLYAHDFQQAQKCYNDCSEVQAFLNSDQNRCAMKLLSAYEEGDAEGIKQAAQSS 180
Query: 280 FIRSMDVEYSRLANCIP 296
I+ +D RLA +P
Sbjct: 181 AIKHLDHVVIRLAKKLP 197
>08_01_1083 +
11096520-11096664,11097543-11097592,11097682-11097754,
11099122-11099201,11099354-11099505,11100653-11100812,
11100886-11100933,11101118-11101198,11101517-11101597
Length = 289
Score = 45.6 bits (103), Expect = 6e-05
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Query: 67 AQCYRIARDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEA 126
A +++A++ +A Y + + + K S AA A +A K+ S E +A
Sbjct: 40 ANSFKLAKNWSRAAQVYIKIANCHLKGDSKHEAASAYVEAANCYKKFS-PQEAAQALNQA 98
Query: 127 SSLYQQHGSGDSAAGLLDKAGRILEQDTP-QLAVKLYQHAADISANESSQHQGIEYISKA 185
L+ + G + AA G I Q+ + A + +AD+ +E Q K
Sbjct: 99 VDLFLEIGRLNMAARYCKDIGEIYHQEQDLEKASDYLEKSADLFDSEGQSSQSNSIKQKV 158
Query: 186 SRLLVRLERYDEAVDNLRREIGFHLEANNL--PAVGRLCVAIVLVQLARGDTVAAEKSYK 243
+ + +LE+Y +A + + I NNL +V + + + QL RGD VA S +
Sbjct: 159 AEIAAQLEQYQKA-NEIFEAIARQQINNNLLKYSVRGILLNAGICQLCRGDVVAITNSME 217
Query: 244 EW 245
+
Sbjct: 218 RY 219
>10_08_0534 + 18595520-18595828,18595917-18597149
Length = 513
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 226 VLVQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIR 282
+ V L D V AEK+Y+EW + + ++ LL AY +E +AL FI+
Sbjct: 334 ISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIK 390
>10_08_0533 + 18592177-18592581,18592674-18593906
Length = 545
Score = 32.7 bits (71), Expect = 0.47
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 226 VLVQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIR 282
+ V L D V AEK+Y+EW + + ++ LL AY +E +AL F++
Sbjct: 366 ISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVK 422
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 32.7 bits (71), Expect = 0.47
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 36 AGEGVHERELRLPTEEV-RACCPASATRVNHQAQCYRIARD-LKQARDCYYRASESYKKN 93
AG G LP E V RA A A+ V ++ R RD L+ R+ A+ + +
Sbjct: 81 AGAGAGADFSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLRE----AAALHARG 136
Query: 94 RSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQD 153
R HAA A A G E A+ A L+Q+ SAA ++D E+
Sbjct: 137 RRVKHAAGA---AAAAGAEGRKAERQ-----RALGLFQRAARLGSAAAMVDAGLMCWEEG 188
Query: 154 TPQLAVKLYQHAADISANESSQHQGIEYI 182
AV YQ AA++ + G+ Y+
Sbjct: 189 RRDEAVGCYQKAAELGHPVGMCNLGVSYL 217
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 31.9 bits (69), Expect = 0.83
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 228 VQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIR 282
V L D V AEK+Y+EW + + ++ L+ AY +E +AL FI+
Sbjct: 713 VLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIK 767
>03_05_0958 - 29200048-29200731
Length = 227
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 287 EYSRLANCIPLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDEENEESPYEP 345
EY RL+ LP+ DP+M++ A P T +A + + ++ EP
Sbjct: 77 EYERLSQSARLPDDADPLMKSDAPAPPAEKLPQPQTPTPTGTPKLQAAERKAQKPAKEP 135
>04_03_0014 +
9404174-9404377,9404508-9404708,9404796-9404862,
9405229-9405332
Length = 191
Score = 29.9 bits (64), Expect = 3.3
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 112 ELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISAN 171
E S ADE + QQ +GD A + ++ + Q V +N
Sbjct: 33 EASAADEEIVHDKKRKKQLQQKKNGDDVA-VPNRKTTLAGQIARAATVFRIDEVVVFDSN 91
Query: 172 ESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRL 221
S ++ G + + +R LVR+ +Y E LRR + F + NNL VG L
Sbjct: 92 SSVENSGDD-VESGARFLVRILQYLETPQYLRRRL-FPMH-NNLKFVGLL 138
>02_04_0196 + 20835495-20837255
Length = 586
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 140 AGLLDKAGRILEQDTPQLAVKLYQHAADISANESS--QHQGIEYISKASRLLVRLERYD 196
A LL +AG + E + L + + HA+ A SS H I + + L+ LE YD
Sbjct: 357 ADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYD 415
>02_05_1248 - 35237036-35237252,35237843-35239491
Length = 621
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 107 LLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQ 152
+L KEL+ D++ +E SSLY+ D A LL ++ +LE+
Sbjct: 397 ILEKKELAAPDKVAEAYVEVSSLYEMVNEFDKAISLLKRSLGMLER 442
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 152 QDTPQLAVKLYQHAADISANESSQHQGIEYISKASRLLVRLERYDEAVDN 201
QD + L + AD + +E QH ++ K +R++R+ +VD+
Sbjct: 63 QDRKERRCSLEKKLADANVSEEEQHNIVKQFEKKETEYMRMQRHKMSVDD 112
>01_03_0307 + 14879564-14879594,14880024-14880182,14880629-14881857
Length = 472
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 316 SYVSPNASTSASVEHHRAYDEENEESPYEPVT 347
SY+S ++++ +EH+ Y ++EE P P T
Sbjct: 436 SYLSGPSTSNFEIEHNTEYRRKDEEMPINPST 467
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,136,411
Number of Sequences: 37544
Number of extensions: 420740
Number of successful extensions: 1293
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1280
Number of HSP's gapped (non-prelim): 14
length of query: 363
length of database: 14,793,348
effective HSP length: 83
effective length of query: 280
effective length of database: 11,677,196
effective search space: 3269614880
effective search space used: 3269614880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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