Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002039-TA|BGIBMGA002039-PA|IPR000744|NSF attachment
protein
(363 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 33 0.063
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 32 0.15
SPAP27G11.02 |||TPR repeat protein, unknown biological role|Schi... 31 0.19
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 30 0.44
SPBC17D1.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 1.0
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 27 4.1
SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 27 4.1
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 27 5.5
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 27 5.5
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 26 7.2
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 26 7.2
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 26 7.2
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.2
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 26 7.2
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 7.2
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 9.6
SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces pomb... 26 9.6
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 26 9.6
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 33.1 bits (72), Expect = 0.063
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 300 PLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDEENEESP 342
P+ PM R +ENAAP +SP A S +V DE E P
Sbjct: 38 PITPMQRPLGKENAAPGTISPIAVRSRNVRAVEIADENACEEP 80
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 31.9 bits (69), Expect = 0.15
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 315 PSYVSPNASTSASVEHHRAYDEENEESPYE 344
PS +S N T S EH +++D+ EE+P E
Sbjct: 335 PSQLSENKLTLESFEHRKSFDQVREEAPLE 364
>SPAP27G11.02 |||TPR repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 31.5 bits (68), Expect = 0.19
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 99 AAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQ-DTPQL 157
A+K +E + +G + +A + +L ++A Q +G + + L +++ + Q TP
Sbjct: 154 ASKLIELSEPLGLQ-KDATKAADLIVKALLSKQFNGDDEQKSRLFEQSATLYFQAGTPSY 212
Query: 158 AVKLYQHAADISANESSQHQGIEYISKASRLLVRLERYDE 197
AV LY A +++ S H I + A+ LL + E D+
Sbjct: 213 AVPLYHEALNLTMANPSCHGLILMNNLATSLLAQTETVDK 252
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 30.3 bits (65), Expect = 0.44
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 244 EWGGHCEMAEVQT--LDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLANCIPLPEPL 301
+WG E + T +D + Y+ + P S + S + IP+PE
Sbjct: 334 DWGSTIEFEDGTTVVIDAKTRRYEPVKRQDTLASNHVPSAPSNESVSSAAPSKIPVPEEA 393
Query: 302 DPMMRAGVRENAA--PSYVSPNASTSASVEHHRAYDEENE 339
+ + + A P V PNA TSA H+ +E E
Sbjct: 394 SINEHSNITDEAVSLPEPVYPNAPTSAVSVHNPTISDEAE 433
>SPBC17D1.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 250
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 160 KLYQHAADISANESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIG 207
KL++ S+ E G+ Y+ RL ++LER ++VD R+E G
Sbjct: 129 KLHKLGRMASSEELPNPDGLRYL--VERLQIKLERLFDSVDTFRQEQG 174
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 228 VQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQ--AYDEEDP 269
+ LARGD AA ++ +GG + QT++ ++ AY +P
Sbjct: 117 ITLARGDVQAAADCFRYYGGWADKDYGQTIETDIKRFAYTRHEP 160
>SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 133 HGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQG-----IEYISKASR 187
+GS DS+ G ++ + P+ A + A I+ + ++++ Y+++ +
Sbjct: 120 YGSWDSSKGKVELTAEQVSHHGPESAAHVVCKEAGITVDTHNKYRSGFSGRTVYVNQLGQ 179
Query: 188 LLVRLERYDE 197
L V LE+Y+E
Sbjct: 180 LRVHLEKYNE 189
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 156 QLAVKLYQHAADISANESSQH----QGIEYISKASRLLVRLERYDEAVDNLRREIGFHLE 211
Q A+ + A NE S+ + IEY+ +A +L V L+ + + + R ++E
Sbjct: 34 QSALDYFMMALKYEKNEKSKEIIRSKVIEYLDRAEKLKVYLQEKNNQISSKSRVSNGNVE 93
Query: 212 ANNLP 216
+N P
Sbjct: 94 GSNSP 98
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 26.6 bits (56), Expect = 5.5
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 283 SMDVEYSRLANCIPLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEH-HRAYDEENEES 341
S D +S PE P+ + V E A P++ SP AS S V H H E++
Sbjct: 46 SDDGLFSNTEEATEAPEADVPVKK--VLEVAVPNFKSP-ASASNDVFHAHIPNFLSVEQT 102
Query: 342 PYEPVTY 348
PY+P Y
Sbjct: 103 PYDPEQY 109
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 26.2 bits (55), Expect = 7.2
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 82 CYYRASESYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAG 141
C+ S S KN +FF A AL L++G +S N A S + + +
Sbjct: 649 CFTIISTSNNKNDNFFKAETAL---LIIGYTISYLAAQTNSAAVDSFILNSGSIKEFFSV 705
Query: 142 LLDKAG-RILEQDTPQLAV 159
LL+ G +L + T LA+
Sbjct: 706 LLEYLGSNVLHKKTTSLAI 724
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 59 SATRVNHQAQCYRIARDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKE 112
S R + + AR+L++ +D Y+AS + + R F A+A E+ L KE
Sbjct: 246 SLERFRSEREAREAARELRRQQDNAYQASLARDRERQAF--ARAEEERLAKEKE 297
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 256 TLDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLANCI 295
TLD LLQA + P+ ++A+R I S + +L + +
Sbjct: 47 TLDVLLQALSDASPEVQQEAVRCVAIISSKIPQDKLKSTV 86
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 291 LANCIPLPEPLDPMMRAGVREN---AAPSYVSPNASTSASV 328
L++ IPLP P+ MR G + A S ++P +AS+
Sbjct: 346 LSSAIPLPNPMSEKMRNGASKQAIMAQSSKINPLPPLTASI 386
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 139 AAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQGIEYISKASRLLVRLERYDEA 198
A + DK G ILE+ + + L IS ++++ + + LVR + + +
Sbjct: 334 ATSICDKLGEILERTDTERSYPLQAMIPSISNTKNAESSSQKAVRTYENYLVRTDPRERS 393
Query: 199 VDNLRREIGFHLEANN 214
+ ++ + +NN
Sbjct: 394 IKSMLSDNFLQRSSNN 409
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 168 ISANESSQHQGIEYISKASRLLVRLER 194
+S SS+HQGI +++ RL V L R
Sbjct: 767 LSCVRSSEHQGIGFVNDPRRLNVALTR 793
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 253 EVQTLDQLLQAYDEEDPDSARK 274
EVQTLD+LLQ E D+ ++
Sbjct: 910 EVQTLDRLLQKVKEHSEDNTKE 931
>SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.8 bits (54), Expect = 9.6
Identities = 19/112 (16%), Positives = 42/112 (37%)
Query: 74 RDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQH 133
RD+K + + + +N+ + G ++ N DE+ + + A
Sbjct: 70 RDVKSSNGTFVNETRLSPENKPSAPCKLNSGDIVDFGVDIYNEDEIVHQKVSAQVRIVVR 129
Query: 134 GSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQGIEYISKA 185
G+ + ++ + V YQ +++ N S G+E +SK+
Sbjct: 130 GATFATTPARSLDSEVMLDSIMRQMVFQYQRCVELNENLESLENGVEEVSKS 181
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 320 PNASTSASVEHHRAYDEENEE 340
P +S AS HHR +D E EE
Sbjct: 147 PPSSVLASQRHHRRHDSELEE 167
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,559,159
Number of Sequences: 5004
Number of extensions: 62105
Number of successful extensions: 219
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 211
Number of HSP's gapped (non-prelim): 19
length of query: 363
length of database: 2,362,478
effective HSP length: 74
effective length of query: 289
effective length of database: 1,992,182
effective search space: 575740598
effective search space used: 575740598
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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