Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002039-TA|BGIBMGA002039-PA|IPR000744|NSF attachment
protein
(363 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52991| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 33 0.36
SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0) 33 0.48
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 31 1.5
SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09) 31 1.5
SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092) 30 2.6
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 30 2.6
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 30 3.4
SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_28211| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 29 4.5
SB_35198| Best HMM Match : rve (HMM E-Value=8.1e-20) 29 5.9
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_23840| Best HMM Match : Casein (HMM E-Value=2.8) 29 5.9
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 29 5.9
SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 7.8
>SB_52991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 80.2 bits (189), Expect = 2e-15
Identities = 42/177 (23%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
Query: 125 EASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQGIEYISK 184
+A+++ ++ D A L++KAG + P+ A++L+ +A D++ E + IE I+
Sbjct: 587 QAATVLKEMKRVDEAVDLIEKAGMCDSLEQPEKAIELFLNAGDLNIAEDKIREAIEPITS 646
Query: 185 ASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDTVAAEKSYKE 244
A+RL ++ ++ E ++ ++ + + NL + + +++++V L GD VAA++ +K+
Sbjct: 647 AARLQLKSKKLAEGIETYKKILDLFQQIENLQMMYKTVLSLIVVYLHEGDYVAADRCFKD 706
Query: 245 ---WGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLANCIPLP 298
G E Q +++L+ +D+ D D P +D E ++L+ + P
Sbjct: 707 ACGIPGFTNSDEAQAGERVLECFDQGDSDGIASCAAQPLFTYLDNEIAKLSRSLRAP 763
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 33.1 bits (72), Expect = 0.36
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 72 IARDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQ 131
++R L + YY +++ ++SFF + A+ + +L A L NLA +LY
Sbjct: 515 LSRSLNEIGVLYY-LQNNHEASKSFFQRSLAMREEILGEDHPEVAQSLHNLA----ALYN 569
Query: 132 QHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADI 168
+ D A L +A I ++ + A+ LY+ A I
Sbjct: 570 DNKQYDKAEPLYKRALDIRLKNKQEDAIALYERALRI 606
>SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 495
Score = 32.7 bits (71), Expect = 0.48
Identities = 31/169 (18%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Query: 77 KQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSG 136
++A Y +A + +++ + A +V + L N +E +A +Y++ G+
Sbjct: 158 EEAMKYYQQALQVFERTGNESGQADVRHNIGVVQQCLGNYEEAMKYYQQALQVYERTGNE 217
Query: 137 DSAAGLLDKAGRILEQ-DTPQLAVKLYQHAADISANESSQHQGIEYISKASRLLVRLERY 195
A + G + ++ + A+K YQ A + + ++ + + RL Y
Sbjct: 218 SKQASVRLNIGGVQQRLGNYEEAMKYYQQALQVYISTGNESKQASVRLNIGGVQQRLGNY 277
Query: 196 DEAVDNLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDTVAAEKSYKE 244
+EA+ ++ + ++ N + I VQ + G+ A K Y++
Sbjct: 278 EEAMKYYQQALQVYISTGNESDQADVRQNIGAVQESLGNYEEAMKYYQQ 326
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 289 SRLANCIPLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDEENEESPYEPVTY 348
++++N L L +M A + ++AA +Y HR + +EN E Y + +
Sbjct: 673 AKISNATELSSLLTTLMWAMIGQHAATTYPIQEYGGFVPNSPHRLFADENGEDKYSTLMF 732
Query: 349 GPKKI 353
G K I
Sbjct: 733 GNKAI 737
>SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 1704
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 276 LRSPFIRSMDVEYSRLANCIPLPEP---LDPMMRAGVRENAAPSYVSPNASTSAS 327
++ P + DVE S L + PLP+ + GV E+AAP+ V N +S S
Sbjct: 986 VQEPIVDGHDVEVSSLLSKEPLPQSPSISSSEHKCGVAEDAAPTLVDSNPCSSRS 1040
>SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09)
Length = 438
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 61 TRVNHQAQCYRIARDLKQARDCYYRASESYKKNRSFFH 98
T V+H R +L ++RD YR+SES K++ H
Sbjct: 41 TMVHHSTNDLRSRENLSKSRDKLYRSSESLHKSKESMH 78
>SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092)
Length = 1270
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/94 (20%), Positives = 40/94 (42%)
Query: 97 FHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQ 156
F + K A +S + E+ + ++ G+G + + + KA +++ Q Q
Sbjct: 677 FGSPKIRSSAGAASNYVSPSSEVHTPLESVTDSGKRPGNGSAISAVSQKASQLISQSVSQ 736
Query: 157 LAVKLYQHAADISANESSQHQGIEYISKASRLLV 190
K QH S +ES + + + ++ + LV
Sbjct: 737 ALSKPIQHLVSQSGSESVRQSAYQSVGQSVKHLV 770
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 70 YRIARDLKQARDCYYRASESYKKNRS 95
YR RD RD YYR S SY ++RS
Sbjct: 280 YRGGRDRDYYRDDYYRGSSSYYRSRS 305
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 29.9 bits (64), Expect = 3.4
Identities = 26/137 (18%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 109 VGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQ-DTPQLAVKLYQHAAD 167
V + L N +E +A ++++ G+ AG+ G + + + A+K YQ A
Sbjct: 541 VQQSLGNYEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQRRLGNYEEAMKYYQQALQ 600
Query: 168 ISANESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLCVAIVL 227
+ ++ + + + L Y+EA+ ++ + + N + I +
Sbjct: 601 VFERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQALQVYERTGNESKQANVRHNIGV 660
Query: 228 VQLARGDTVAAEKSYKE 244
VQ + G+ A K Y++
Sbjct: 661 VQQSLGNYEEAMKYYQQ 677
>SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.9 bits (64), Expect = 3.4
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 258 DQLLQAYDEEDPDSARKALRSPFI---RSMDVEYSRLA-NCIPLPEPLDPMMRAGVREN- 312
D+ LQ+ +E P S + R RS DV ++ N PLP P D + A VR++
Sbjct: 462 DKSLQSANESTPQSGSMSARERRRMKQRSSDVMSPAVSLNAPPLPSPRDLIAAARVRKSQ 521
Query: 313 AAPSYVSPNASTSASVEHHRAYDEENEESPYEPVT 347
+ V+P S+S + +YD + P +PVT
Sbjct: 522 ESMGDVTPR-SSSRDRPNRSSYDSVDGPRP-KPVT 554
>SB_28211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 89 SYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLD 144
+Y KN+S+ A + L++ + SN DE+ L + ++L+ SG S +LD
Sbjct: 32 TYAKNKSYHRFAHGDRRFLVLSPDASNTDEINELLTDCAALF----SGTSTLLVLD 83
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 29.5 bits (63), Expect = 4.5
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 187 RLLVRLERYDEAVDNLRREIGFHLE-ANNLPAVGRLCVAIVLVQLARGDTVAAEKSYKEW 245
R L L+ + V NL + GF + ANNLP V I L++ + + A W
Sbjct: 1495 RDLHALDYHMRGVRNLSCDGGFDPDQANNLPVVLSYDALITLIEHLKACSEVASSRISNW 1554
Query: 246 GGHCEMAEVQTLDQLLQA 263
+C + E L LL+A
Sbjct: 1555 QAYC-IQEKSGLSFLLRA 1571
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 152 QDTPQLAVKLYQHAAD---ISANESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIGF 208
Q T QL + HA +S +S +G +Y+ + L RL YD A+D+L +
Sbjct: 857 QGTEQLRESNFAHALSFFSVSVFATSGQKG-DYLRMRCKCLERLRMYDRAIDDLSTVMSM 915
Query: 209 HLEANNLPAVGRLC 222
P +G LC
Sbjct: 916 -----GAPMIGDLC 924
>SB_35198| Best HMM Match : rve (HMM E-Value=8.1e-20)
Length = 745
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 111 KELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISA 170
KE + + + S+ + G+G++ +G+ A RIL+QD P LA+ Y+ +
Sbjct: 553 KEFEEFSKEYGFTHDPSTPHFPQGNGEAESGVRI-AKRILKQDDPFLALMTYRATPTQAT 611
Query: 171 NES 173
ES
Sbjct: 612 KES 614
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 207 GFHLEANNLPAVGRLCVAIVLVQLARGDTVAAEKSYKEWGGHCEM 251
G L + L VGR+ V+ L +L R +A+ + + +GGH EM
Sbjct: 1724 GHTLSVSGLQVVGRVLVSSCLDKLIRCYDLASAELLQVYGGHKEM 1768
>SB_23840| Best HMM Match : Casein (HMM E-Value=2.8)
Length = 501
Score = 29.1 bits (62), Expect = 5.9
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 18/151 (11%)
Query: 145 KAGRILEQDTPQLAVKLYQHAADISANESSQHQGI----EYISKASRLLVRLERYDEAVD 200
K G ILE + P L HAA I+ NE+ HQ I E + + LV L+R D
Sbjct: 46 KIGGILESELPVDEAAL--HAAVIAINEAIDHQDIAGTMEALQNPNAHLVDLDR-----D 98
Query: 201 NLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQL 260
NL H RL + +G+ S ++ E A + + +
Sbjct: 99 NL-MSTKLHCSKGEEDIYDRLLTQAEI----QGNVNKVNDSVRK--RRAEAALEEAVFSI 151
Query: 261 LQAYDEEDPDSARKALRSPFIRSMDVEYSRL 291
+A +ED D+ RK L + R +V+ + +
Sbjct: 152 NKALADEDQDALRKGLMNKSSRLKEVDTNHM 182
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 89 SYKKNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLD 144
+Y KN+S+ A ++ L++ + SN DE+ L + ++L+ SG S +LD
Sbjct: 1699 TYAKNKSYRRFAHGDKRFLVLSPDASNTDEINELLTDCAALF----SGTSTLLVLD 1750
>SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 28.7 bits (61), Expect = 7.8
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 243 KEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLANCIPLPEP-- 300
K WG H E E ++ + + Y E RS I S ++ S + L +
Sbjct: 144 KSWGEHPESDESESEGEEMDEYHEAMKKLKVNRSRSVLIASTNLLKSLKRKRLILKKDRR 203
Query: 301 --LDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDEENEESP 342
L R + EN P SPN + S R +E + SP
Sbjct: 204 LSLVAQRRESLVENQLPGQTSPNNFLTVSDSLQRLNEELDSRSP 247
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.7 bits (61), Expect = 7.8
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 121 NLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQ-GI 179
+LA E + L Q G G + L+K + LE + +L L + + E + +
Sbjct: 1540 SLASEVNDLADQLGEGGKSVVELEKLRKRLEMEKEELQTALEEAEGALEGEEGKVLKIQL 1599
Query: 180 EYISKASRLLVRLERYDEAVDNLRREIGFHLEA 212
E +L DE +D LR+ L+A
Sbjct: 1600 EMTQLKQEFERKLADRDEEIDTLRKNHQRQLDA 1632
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,385,735
Number of Sequences: 59808
Number of extensions: 445560
Number of successful extensions: 1276
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1266
Number of HSP's gapped (non-prelim): 22
length of query: 363
length of database: 16,821,457
effective HSP length: 83
effective length of query: 280
effective length of database: 11,857,393
effective search space: 3320070040
effective search space used: 3320070040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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