Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002039-TA|BGIBMGA002039-PA|IPR000744|NSF attachment
protein
(363 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-18|CAB60957.2| 299|Caenorhabditis elegans Hypothetical... 126 2e-29
AL132898-17|CAJ90509.1| 145|Caenorhabditis elegans Hypothetical... 60 3e-09
U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical pr... 40 0.004
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 36 0.045
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 33 0.42
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 31 1.7
U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoy... 29 3.9
U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoy... 29 3.9
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 29 3.9
Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p... 29 5.2
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p... 29 5.2
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 5.2
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 5.2
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 29 5.2
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 5.2
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 5.2
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 5.2
AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical ... 29 6.8
>AL132898-18|CAB60957.2| 299|Caenorhabditis elegans Hypothetical
protein Y59A8B.8 protein.
Length = 299
Score = 126 bits (305), Expect = 2e-29
Identities = 76/246 (30%), Positives = 132/246 (53%), Gaps = 8/246 (3%)
Query: 59 SATRVNHQAQCYRIARDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNADE 118
+A+ + + CYR A+D K+A +A+E Y++NR+ FHAAKA E A ++ +++ E
Sbjct: 37 AASAMERASVCYRNAQDPKKAAGSLLKAAEYYEQNRNLFHAAKAREGAAMLLRDIKEFSE 96
Query: 119 LFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKLYQHAADISANESSQHQG 178
L +A + Y + GS D+AA ++KA +L+ D P+ A+++YQ +
Sbjct: 97 AVVLFEKAINGYAESGSLDTAAMTVEKAADVLKNDNPKEALQIYQRGLALVQQSDRAKMA 156
Query: 179 IEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDTVAA 238
++ + ++L ++L Y A+ ++R EI E P +G+L + +V+V LA D+VAA
Sbjct: 157 SNFLKQITKLSLQLTDYKGALGSIREEIEKFAEIREYPRIGQLGIGLVIVNLALEDSVAA 216
Query: 239 EKSYKEWGGHCEMAEVQT------LDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLA 292
K Y W C+ + QT + L+ Y+ D +S + L+ +RSMD EY R+
Sbjct: 217 LKDY-GW-VICQSPDFQTSEDGRVCENLIGFYEAGDDESFQNVLKCGALRSMDNEYLRVM 274
Query: 293 NCIPLP 298
+ P
Sbjct: 275 KILKAP 280
Score = 32.7 bits (71), Expect = 0.42
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 10/189 (5%)
Query: 58 ASATRVNHQAQCYRIARDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNAD 117
++ R+ A+C R +A DC + K F AA A+E+A + + +
Sbjct: 2 SNTARLKEAAECER------KAEDCMKTSMIKLKFKPDFDGAASAMERASVCYRNAQDPK 55
Query: 118 ELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQL--AVKLYQHAADISANESSQ 175
+ L+A+ Y+Q+ + AA + A +L +D + AV L++ A + A S
Sbjct: 56 KAAGSLLKAAEYYEQNRNLFHAAKAREGAAMLL-RDIKEFSEAVVLFEKAINGYAESGSL 114
Query: 176 HQGIEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDT 235
+ KA+ +L + + EA+ +R + +++ I + L D
Sbjct: 115 DTAAMTVEKAADVL-KNDNPKEALQIYQRGLALVQQSDRAKMASNFLKQITKLSLQLTDY 173
Query: 236 VAAEKSYKE 244
A S +E
Sbjct: 174 KGALGSIRE 182
>AL132898-17|CAJ90509.1| 145|Caenorhabditis elegans Hypothetical
protein Y59A8B.25 protein.
Length = 145
Score = 59.7 bits (138), Expect = 3e-09
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 181 YISKASRLLVRLERYDEAVDNLRREIGFHLEANNLPAVGRLCVAIVLVQLARGDTVAAEK 240
++ + ++L ++L Y A+ ++R EI E P +G+L + +V+V LA D+VAA K
Sbjct: 5 FLKQITKLSLQLTDYKGALGSIREEIEKFAEIREYPRIGQLGIGLVIVNLALEDSVAALK 64
Query: 241 SYKEWGGHCEMAEVQT------LDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRLANC 294
Y W C+ + QT + L+ Y+ D +S + L+ +RSMD EY R+
Sbjct: 65 DY-GW-VICQSPDFQTSEDGRVCENLIGFYEAGDDESFQNVLKCGALRSMDNEYLRVMKI 122
Query: 295 IPLP 298
+ P
Sbjct: 123 LKAP 126
>U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical
protein D1014.3 protein.
Length = 295
Score = 39.5 bits (88), Expect = 0.004
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 4/133 (3%)
Query: 70 YRIARDLKQARDCYYRASESYKKNRSFFH-AAKALEQALLVGKELSNADELFNLALEASS 128
+++A++ + A D + A+E Y KN H A +A +++ + + S
Sbjct: 50 FKMAKNWQAAGDAFLEAAEFYAKNGDSKHDCATQYAEAANCFRKIQ-PERAVQCLEKTSE 108
Query: 129 LYQQHGSGDSAAGLLDKAGRILEQDTP--QLAVKLYQHAADISANESSQHQGIEYISKAS 186
+Y G AA + E + P + VK YQ AAD E + + + K +
Sbjct: 109 IYTDMGRFTMAAKNHVSIAELYETELPDKEQCVKHYQQAADYYKGEEQKSSASKCLVKVA 168
Query: 187 RLLVRLERYDEAV 199
LE+Y +A+
Sbjct: 169 MYSAELEKYSQAI 181
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 35.9 bits (79), Expect = 0.045
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 92 KNRSFFHAAKALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILE 151
K +S +LE +GK ++ ++ A + + +Y++ AG+L+K G L
Sbjct: 533 KAKSLIFEDLSLENRPKIGKLIA-LEQALTEAQDTNDMYRE-------AGILEKMGHFLA 584
Query: 152 QDTPQLAVKLYQHAADISANESSQHQGIEYISKASRLLVRLERYDEAVDNLRREIG-FHL 210
++ +LA K Y ++ + + + + L +Y EA ++ R + F L
Sbjct: 585 ENNEKLAEKYYNQQLEVGKQLKNAKMMADAHANVANLKFLAGKYPEACEHSRCALTIFKL 644
Query: 211 EANNLPAVGRLCVAIVLVQLARGDTVAA 238
+NN V + + + +L R +T A
Sbjct: 645 ASNNEKKV-EMLILLARAELERNNTEIA 671
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
protein B0464.2 protein.
Length = 1150
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 137 DSAAGLLDKAGRILEQDTPQLAVKLYQHAAD-ISANESSQHQGIEYISKASRLLVRLERY 195
D +D A ++LE P+ +++LY++A D + NES Q Q E ++ L + +++Y
Sbjct: 430 DDYEACIDLA-QLLEATDPKRSLELYENAIDLLVTNESIQPQP-EMLNNVGALYMSMKQY 487
Query: 196 DEAVDNLRR 204
++A + +R
Sbjct: 488 EKAEHHFKR 496
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 30.7 bits (66), Expect = 1.7
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 16/191 (8%)
Query: 101 KALEQALLVGKELSNADELFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVK 160
+ALE+ LV K S+ D +AL ++L+ + G ++A +L AG LEQ +L V
Sbjct: 377 RALEE--LVAKFGSSKD----VALIEATLHFKMGDAEAALKVL--AGSDLEQSLARLHVL 428
Query: 161 LYQHAAD--ISANESSQHQG-IEYISKASRLLVRLERYDEAVDNLRREIGFHLEANNLP- 216
L + A G + S + L+ + DEAV L + N P
Sbjct: 429 LNAGRLPEAVGAIRDLPISGKLGASSLLTSTLIAADSRDEAVKEL---VAASTAKNQTPE 485
Query: 217 AVGRLCVAIVLVQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQAYDEEDPDSARKAL 276
A+ + +V V+ RG+ AA K ++ ++Q +L+ AY + DP A
Sbjct: 486 ALKSILEDLVEVEQQRGNETAATKHLEKLVEKFP-EDLQLQCRLVGAYSKTDPKKAESLS 544
Query: 277 RSPFIRSMDVE 287
F +M+V+
Sbjct: 545 AKLFPETMEVD 555
>U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform b protein.
Length = 434
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 207 GFHLEANNLPAVGRLCVAIVL---VQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQA 263
GF ++ +PA + I + V A + A +S E+ H +M ++ L +
Sbjct: 131 GFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERLLLEQEQ 190
Query: 264 YDEEDPDSARKALRSPFIRSMDVEYSRLANCIPLPEPLDPMMRAGVR 310
D++DP A+ R + + V Y A+ PLP+ ++ R VR
Sbjct: 191 RDKKDPKKAKSVRRFIVVEGLYVNY---ADLCPLPKIIEFKWRFKVR 234
>U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform a protein.
Length = 458
Score = 29.5 bits (63), Expect = 3.9
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 207 GFHLEANNLPAVGRLCVAIVL---VQLARGDTVAAEKSYKEWGGHCEMAEVQTLDQLLQA 263
GF ++ +PA + I + V A + A +S E+ H +M ++ L +
Sbjct: 155 GFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERLLLEQEQ 214
Query: 264 YDEEDPDSARKALRSPFIRSMDVEYSRLANCIPLPEPLDPMMRAGVR 310
D++DP A+ R + + V Y A+ PLP+ ++ R VR
Sbjct: 215 RDKKDPKKAKSVRRFIVVEGLYVNY---ADLCPLPKIIEFKWRFKVR 258
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 282 RSMDVEYSRLANCIPLPEPLDPMMRAGVRENAAPSYVSPNASTSASV 328
R+ V+ R +NC+P+P + + + A S+ S +STS+++
Sbjct: 90 RTQSVDVRRASNCLPVPGTPSTIPNPQLTQRRATSFRSNGSSTSSTL 136
>Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 82 CYYRASESYKKNRSFFHAAKALEQALLVGKELSNAD--ELFNLALEASSLYQQHGSGDSA 139
C A E +KN + AKA+EQ + + L A+ N A+ Y Q G ++A
Sbjct: 217 CVQEAFELAEKNNAVREYAKAIEQHGNISQALELAEYYNRVNDMFMAAKFYTQAGQYNNA 276
Query: 140 AGLLDKAG 147
LL K G
Sbjct: 277 INLLFKNG 284
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 82 CYYRASESYKKNRSFFHAAKALEQALLVGKELSNAD--ELFNLALEASSLYQQHGSGDSA 139
C A E +KN + AKA+EQ + + L A+ N A+ Y Q G ++A
Sbjct: 1024 CVQEAFELAEKNNAVREYAKAIEQHGNISQALELAEYYNRVNDMFMAAKFYTQAGQYNNA 1083
Query: 140 AGLLDKAG 147
LL K G
Sbjct: 1084 INLLFKNG 1091
>Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 82 CYYRASESYKKNRSFFHAAKALEQALLVGKELSNAD--ELFNLALEASSLYQQHGSGDSA 139
C A E +KN + AKA+EQ + + L A+ N A+ Y Q G ++A
Sbjct: 217 CVQEAFELAEKNNAVREYAKAIEQHGNISQALELAEYYNRVNDMFMAAKFYTQAGQYNNA 276
Query: 140 AGLLDKAG 147
LL K G
Sbjct: 277 INLLFKNG 284
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 82 CYYRASESYKKNRSFFHAAKALEQALLVGKELSNAD--ELFNLALEASSLYQQHGSGDSA 139
C A E +KN + AKA+EQ + + L A+ N A+ Y Q G ++A
Sbjct: 1024 CVQEAFELAEKNNAVREYAKAIEQHGNISQALELAEYYNRVNDMFMAAKFYTQAGQYNNA 1083
Query: 140 AGLLDKAG 147
LL K G
Sbjct: 1084 INLLFKNG 1091
>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 249 CEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRL 291
C A +TL+QLL A+DE A + + +S ++Y RL
Sbjct: 616 CSQATEETLEQLLNAFDERRQIDVVTAFTTMY-QSRKIQYERL 657
>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 249 CEMAEVQTLDQLLQAYDEEDPDSARKALRSPFIRSMDVEYSRL 291
C A +TL+QLL A+DE A + + +S ++Y RL
Sbjct: 616 CSQATEETLEQLLNAFDERRQIDVVTAFTTMY-QSRKIQYERL 657
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 5.2
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 62 RVNHQAQCYRIARDLKQ-ARDCYYRAS-ESYKKNRSFFHAAKALEQAL-LVGKELSNADE 118
+++ Q Q +AR + AR +A+ E KK +S + LEQ L L K + E
Sbjct: 389 KMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTE 448
Query: 119 LFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKL-------YQHAADISAN 171
+ +S+ + G+ S+ L + R E++T L + YQH I+
Sbjct: 449 QRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEW 508
Query: 172 ESSQHQGIEYISKAS-RLLVRLERYDEAVDNLRRE 205
++ + EYI K + R+ +D + L E
Sbjct: 509 KNRAEKAEEYIEKENHRVQNASSSHDADITRLENE 543
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 5.2
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 62 RVNHQAQCYRIARDLKQ-ARDCYYRAS-ESYKKNRSFFHAAKALEQAL-LVGKELSNADE 118
+++ Q Q +AR + AR +A+ E KK +S + LEQ L L K + E
Sbjct: 389 KMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTE 448
Query: 119 LFNLALEASSLYQQHGSGDSAAGLLDKAGRILEQDTPQLAVKL-------YQHAADISAN 171
+ +S+ + G+ S+ L + R E++T L + YQH I+
Sbjct: 449 QRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEW 508
Query: 172 ESSQHQGIEYISKAS-RLLVRLERYDEAVDNLRRE 205
++ + EYI K + R+ +D + L E
Sbjct: 509 KNRAEKAEEYIEKENHRVQNASSSHDADITRLENE 543
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 296 PLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDE--ENEESPYE 344
PLP D +R ++E A S P TS++ H +E ENEESP+E
Sbjct: 213 PLP---DFSIRTPLKEEATTSV--PREKTSSAAPAHSPIEEMSENEESPFE 258
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 296 PLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDE--ENEESPYE 344
PLP D +R ++E A S P TS++ H +E ENEESP+E
Sbjct: 763 PLP---DFSIRTPLKEEATTSV--PREKTSSAAPAHSPIEEMSENEESPFE 808
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 296 PLPEPLDPMMRAGVRENAAPSYVSPNASTSASVEHHRAYDE--ENEESPYE 344
PLP D +R ++E A S P TS++ H +E ENEESP+E
Sbjct: 763 PLP---DFSIRTPLKEEATTSV--PREKTSSAAPAHSPIEEMSENEESPFE 808
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.1 bits (62), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 82 CYYRASESYKKNRSFFHAAKALEQALLVGKELSNAD--ELFNLALEASSLYQQHGSGDSA 139
C A E +KN + AKA+EQ + + L A+ N A+ Y Q G ++A
Sbjct: 1024 CVQEAFELAEKNNAVREYAKAIEQHGNISQALELAEYYNRVNDMFMAAKFYTQAGQYNNA 1083
Query: 140 AGLLDKAG 147
LL K G
Sbjct: 1084 INLLFKNG 1091
>AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical
protein F37C4.5a protein.
Length = 556
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 61 TRVNHQAQCYRIARDLKQARDCYYRASESYKKNRSFFHAAKALEQALLVGKELSNADEL 119
T V+ +AQ + +DL++A + Y RAS+ Y N + A +++V E A +L
Sbjct: 157 TTVDLRAQIRTLDQDLRKAEEEYARASQDY-DNTGYRWRNSAQYASIIVESEAGGAAQL 214
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,379,909
Number of Sequences: 27539
Number of extensions: 335228
Number of successful extensions: 1033
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1020
Number of HSP's gapped (non-prelim): 32
length of query: 363
length of database: 12,573,161
effective HSP length: 82
effective length of query: 281
effective length of database: 10,314,963
effective search space: 2898504603
effective search space used: 2898504603
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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