Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002037-TA|BGIBMGA002037-PA|undefined
         (70 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M59501-1|AAA28994.1|  462|Drosophila melanogaster tube protein p...    26   7.4  
AY061215-1|AAL28763.1|  462|Drosophila melanogaster LD16174p pro...    26   7.4  
AY060718-1|AAL28266.1|  561|Drosophila melanogaster GH16191p pro...    26   7.4  
AE014297-3361|AAF56165.2|  561|Drosophila melanogaster CG31148-P...    26   7.4  
AE014297-74|AAF52136.3|  462|Drosophila melanogaster CG10520-PA ...    26   7.4  

>M59501-1|AAA28994.1|  462|Drosophila melanogaster tube protein
          protein.
          Length = 462

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 43 RNLGDQIPPKMLVQKATGNHCTNFPRE 69
          R L   IP  M VQ  +G  C NFP E
Sbjct: 55 RKLMSIIPKGMDVQACSGAGCLNFPAE 81


>AY061215-1|AAL28763.1|  462|Drosophila melanogaster LD16174p
          protein.
          Length = 462

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 43 RNLGDQIPPKMLVQKATGNHCTNFPRE 69
          R L   IP  M VQ  +G  C NFP E
Sbjct: 55 RKLMSIIPKGMDVQACSGAGCLNFPAE 81


>AY060718-1|AAL28266.1|  561|Drosophila melanogaster GH16191p
           protein.
          Length = 561

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 10  WCSLLENERSNGDRAIGGITIHTRQDNLYGRG-VRNLGDQIPPKMLV 55
           W  ++   R N    + G+++H   D ++G   +    +  P K+L+
Sbjct: 356 WFKMMNRTRPNSIDYLDGLSLHWYWDEIFGNSFIEQTKEYAPDKILI 402


>AE014297-3361|AAF56165.2|  561|Drosophila melanogaster CG31148-PA
           protein.
          Length = 561

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 10  WCSLLENERSNGDRAIGGITIHTRQDNLYGRG-VRNLGDQIPPKMLV 55
           W  ++   R N    + G+++H   D ++G   +    +  P K+L+
Sbjct: 356 WFKMMNRTRPNSIDYLDGLSLHWYWDEIFGNSFIEQTKEYAPDKILI 402


>AE014297-74|AAF52136.3|  462|Drosophila melanogaster CG10520-PA
          protein.
          Length = 462

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 43 RNLGDQIPPKMLVQKATGNHCTNFPRE 69
          R L   IP  M VQ  +G  C NFP E
Sbjct: 55 RKLMSIIPKGMDVQACSGAGCLNFPAE 81


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.134    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,693,222
Number of Sequences: 52641
Number of extensions: 125303
Number of successful extensions: 158
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 155
Number of HSP's gapped (non-prelim): 5
length of query: 70
length of database: 24,830,863
effective HSP length: 50
effective length of query: 20
effective length of database: 22,198,813
effective search space: 443976260
effective search space used: 443976260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)