GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002037-TA|BGIBMGA002037-PA|undefined
         (70 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   0.41 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   0.41 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   0.41 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   6.6  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory
          receptor candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 0.41
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 1  MAAATNRLPWCSLLEN 16
          +   T R  WC LLEN
Sbjct: 77 LTTITKRNQWCKLLEN 92


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory
          receptor candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 0.41
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 1  MAAATNRLPWCSLLEN 16
          +   T R  WC LLEN
Sbjct: 77 LTTITKRNQWCKLLEN 92


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 0.41
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 1   MAAATNRLPWCSLLEN 16
           +   T R  WC LLEN
Sbjct: 397 LTTITKRNQWCKLLEN 412


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 37 LYGRGVRNLGDQIPPKM 53
          ++G+ VR LG Q  P +
Sbjct: 37 VFGKQVRELGSQWIPDL 53


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,476
Number of Sequences: 317
Number of extensions: 486
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 70
length of database: 114,650
effective HSP length: 44
effective length of query: 26
effective length of database: 100,702
effective search space:  2618252
effective search space used:  2618252
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
S2: 35 (18.2 bits)