Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002033-TA|BGIBMGA002033-PA|IPR007110|Immunoglobulin-
like, IPR003599|Immunoglobulin subtype, IPR013098|Immunoglobulin I-set
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0684 - 19870715-19872994 31 1.1
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 30 2.4
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 30 2.4
01_06_0128 - 26727484-26728383 30 2.4
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 30 3.2
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 30 3.2
01_06_1384 + 36888265-36889577,36889683-36889908 30 3.2
12_01_0231 + 1744323-1745276,1745516-1746193 29 4.3
01_06_1313 - 36212524-36213669 29 4.3
04_04_1114 + 30995816-30996229,30997054-30997129,30997493-309975... 29 5.6
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 29 5.6
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 29 7.5
11_01_0234 + 1804581-1805357,1805941-1806447 29 7.5
07_01_0612 - 4531748-4532298,4532416-4532920,4532998-4533604,453... 29 7.5
06_01_0125 + 970746-970967,971126-971226,971897-972026,972108-97... 29 7.5
02_01_0435 - 3164421-3165032 29 7.5
09_02_0548 - 10467342-10468810,10470309-10471632 28 9.9
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 28 9.9
03_02_0202 + 6366066-6367292,6367529-6367753,6368422-6368799 28 9.9
03_01_0131 - 1013982-1016246 28 9.9
>10_08_0684 - 19870715-19872994
Length = 759
Score = 31.5 bits (68), Expect = 1.1
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 42 KSRAGASLDDRFVSTEEAGGVRLTVSTARTGDTGVYTLQASNAAGSDTARVRLEVSAEES 101
K+ AG +++ + G + S D G T AS AAG+ + +A+ +
Sbjct: 182 KAIAGGGCNNKIIGARAFGSAAVNSSAPPVDDAGHGTHTASTAAGNFVENANVRGNADGT 241
Query: 102 PSGEDPPTFLRRLQDLTVKVGTRTR-FLVEIISSTECKV 139
SG P L KV TR+R +++II+ + V
Sbjct: 242 ASGMAPHAHL-----AIYKVCTRSRCSIMDIIAGLDAAV 275
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 176 GRWTCTAENVGGRASCSAHLNVLVPKAYKRPEFVEELRALLTEQGTVSLEC 226
G WTC GG HL+ L E + L +L E GT + +C
Sbjct: 181 GFWTCRFRRSGGDELVDVHLSCLKELMSHSHETLTNLYEILMEDGTPTNDC 231
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 210 EELRALLTEQGTVSLECKVVGVPTPVLRWFKDSREIKAGDVFALTANAE 258
E L + T++ TV +EC G ++ S+EIK G++ A+T E
Sbjct: 150 EVLCEVETDKATVEMECMEEGYLAKIIHG-DGSKEIKVGEIIAVTVEEE 197
>01_06_0128 - 26727484-26728383
Length = 299
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 53 FVSTEEAGGVRLTVSTARTGDTGVYTLQAS-NAAGS-DTARVRLEVSAEESPSGEDPPTF 110
F + EEA V + G + AS N+AG+ D V E AE SP+ P +
Sbjct: 132 FDTAEEAARVYDNAAIQLRGPSATTNFSASTNSAGAQDPVAVGYESGAESSPAVSSPTSV 191
Query: 111 LRRLQDL 117
LR++ L
Sbjct: 192 LRKVPSL 198
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 210 EELRALLTEQGTVSLECKVVGVPTPVLRWFKDSREIKAGDVFALTANAED 259
E L + T++ TV +EC G ++ ++EIK G++ A+T E+
Sbjct: 108 EVLCEVETDKATVEMECMEEGYLAKIIHG-DGAKEIKVGEIIAVTVEEEE 156
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 234 PVLRWFKDSREIKAGDVFALTANAEDPTSLGTYTCEAVNCMGRAYSSSKVHVVGRASREG 293
PV + + S + D+ L +A+D + G Y V M R +S + + AS +
Sbjct: 615 PVWQEVERSSLLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMFSGANASSLSLASTDS 674
Query: 294 SLKPNSSGLSPEPPPIFTRELEDQYVRI-CE 323
S N S T LED Y+++ CE
Sbjct: 675 SYSSNYS---------TTNVLEDSYLKLKCE 696
>01_06_1384 + 36888265-36889577,36889683-36889908
Length = 512
Score = 29.9 bits (64), Expect = 3.2
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 60 GGVRLTVSTARTGDTGVYTLQASNAAGSDTARVRLEVSAEESPS-GEDPPTFLRRLQDLT 118
GGVRL+ + V + A G AR L S + S G D FLRR+Q+L
Sbjct: 41 GGVRLSRGQSSLASWSV-GMTRRRAGGHQMARRALSASIDSIGSDGGDDEEFLRRIQELA 99
Query: 119 V 119
V
Sbjct: 100 V 100
>12_01_0231 + 1744323-1745276,1745516-1746193
Length = 543
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 44 RAGASLDDRFVSTEEAGGVRLTVSTARTGDTGVYTLQASNAAGSDTARVRLEVSAEESPS 103
R A F+ + AGGV + AR G+ G L AG + E+SPS
Sbjct: 177 RDAADFSRVFLIGDSAGGVLVHNVAARAGEAGAEALDPIRLAGGVLLHPGF-ILPEKSPS 235
Query: 104 G-EDPPT 109
E+PPT
Sbjct: 236 ELENPPT 242
>01_06_1313 - 36212524-36213669
Length = 381
Score = 29.5 bits (63), Expect = 4.3
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 34 VRAFILNTKSRAGASLDDRFVSTEEAGGVRLTVSTARTGDTGVYTLQASNAAGSDTARVR 93
V + + K+ + DD+ ST AG ++TV+ A T D A DT+ V
Sbjct: 14 VDVHLADAKTPPTITSDDKTPSTTVAGD-KITVTGAETEDL------VRGEAIYDTSDVA 66
Query: 94 LEVSAEESPSGEDPP 108
+ S ESPSG PP
Sbjct: 67 SDSSFPESPSGVRPP 81
>04_04_1114 +
30995816-30996229,30997054-30997129,30997493-30997587,
30997729-30997812,30998094-30998181,30998485-30998609,
30998687-30998785,31000089-31000190,31001570-31001680
Length = 397
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 91 RVRLEVSAE-ESPSGEDPPTFLR 112
RVR V+ E E+P E PPTFLR
Sbjct: 2 RVRASVAIEKETPESEPPPTFLR 24
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 210 EELRALLTEQGTVSLECKVVGVPTPVLRWFKDSREIKAGDVFALTANAE 258
E L + T++ TV +EC G ++ ++EIK G++ A+T E
Sbjct: 1653 EVLCEVETDKATVEMECMEEGYLAKIIHG-DGAKEIKVGEIIAVTVEEE 1700
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 28.7 bits (61), Expect = 7.5
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 46 GASLDDRFVSTEEAGGVRLTVSTART--GDTGVYTLQASNAAGSD--TARVRLEVSAEES 101
G L R++S AG R+ + + G TG+Y++ + G D A+++ ++ EE+
Sbjct: 173 GECLVGRYISRSVAGHGRILLGKVASYDGSTGIYSVVFEDGQGEDLELAQLQSQLVGEEN 232
Query: 102 PSGEDPPTFLRRLQDLTVKVGTRT 125
+ + +R DL V G T
Sbjct: 233 GAFGMKVSCRKRKLDLLVSSGGAT 256
>11_01_0234 + 1804581-1805357,1805941-1806447
Length = 427
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 53 FVSTEEAGGVRLTVSTARTGDTGVYTLQASNAAGSDTARVRLEVSAEESPSG-EDPPT 109
F+ + AGGV + AR G+ G L AG + E+SPS E+PPT
Sbjct: 186 FLIGDSAGGVLVHNVAARAGEAGAEALDPIRLAGGVQLHPGF-ILPEKSPSELENPPT 242
>07_01_0612 -
4531748-4532298,4532416-4532920,4532998-4533604,
4533723-4533760,4533850-4533951
Length = 600
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 55 STEEAGGVRLTVSTARTGDTGVYT-LQASNAAGSDTARV 92
+ E GGV +T+ RT D GVY L+ ++ G+ R+
Sbjct: 384 ANERVGGVDITIKGRRTDDGGVYLGLRIADKNGTGRGRI 422
>06_01_0125 +
970746-970967,971126-971226,971897-972026,972108-972333,
972400-972502,972519-972594,972710-973333
Length = 493
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 67 STARTGDTGVYTLQASNAAGSDTARVRLEVSAEESPSGEDPPTFLRRLQDLTVKVGTR-T 125
+ A ++G + + G D+A+ R S E+ S L+RLQ+ + K +
Sbjct: 340 TVAGHAESGNENIDTARPEGRDSAKRRRSKSYAETSSSSTAVEVLQRLQEKSEKTELKQD 399
Query: 126 RFLVEIISSTECKVTWYRN 144
+ +VEI+S + K+ R+
Sbjct: 400 QQMVEILSRKDGKIKIQRD 418
>02_01_0435 - 3164421-3165032
Length = 203
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 260 PTSLGTYTCEAVNCMGRAYSSSKVHVVGRASREGSLKPNSSGLSPEPPP 308
P LGT+ ++ RAY ++ + G A+R SS P PPP
Sbjct: 36 PIWLGTF--DSAEAAARAYDAAARSLRGAAARTNFPPSTSSSAPPPPPP 82
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 28.3 bits (60), Expect = 9.9
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 37 FILNTKSRAGASLDDRFVSTEEAGGVRLTVSTARTGDTGV--YTLQASNAAGSDTARVRL 94
++LN +L F S GG RL STA GD + L A++ G RV
Sbjct: 701 YLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFVGRANGRVYW 760
Query: 95 EVSAEE 100
E+ +E
Sbjct: 761 EIEGDE 766
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 288 RASREGSLKPNSSGLSPEPPPIFTRELEDQYV 319
RA++ + P+SS +P PPP + +D YV
Sbjct: 5 RAAKRPKVDPSSSSSAPPPPPPPPQRGDDDYV 36
>03_02_0202 + 6366066-6367292,6367529-6367753,6368422-6368799
Length = 609
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 39 LNTKSRAGASLDDRFVSTEEAGGVRLTVSTARTGDTG---VYTLQASNAAGSDTARVRLE 95
+ ++ R GAS+D R G L + A G G +L+ A + A +R+
Sbjct: 432 VGSEVRCGASIDGR-----RGLGPALMAAAASCGVQGFKVACSLRDPAPASTAVASIRIS 486
Query: 96 VSAEESPSGEDPPTFLRRLQDLTVKVGTRTRFLVEIIS 133
+ + P L LQ++T+ TRT ++++S
Sbjct: 487 LFKDRDTLANHPKLTLELLQEVTITGFTRTDEEIDLVS 524
>03_01_0131 - 1013982-1016246
Length = 754
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 42 KSRAGASLDDRFVSTEEAGGVRLTVSTARTGDTGVYTLQASNAAGSDTARVRLEVSAEES 101
K+ +G +++ + G + + D G T AS AAG+ + +A +
Sbjct: 175 KAISGGGCNNKIIGARAFGSAAVNATAPPVDDAGHGTHTASTAAGNFVENADVRGNAHGT 234
Query: 102 PSGEDPPTFLRRLQDLTVKVGTRTR-FLVEIISSTECKV 139
SG P L KV TR+R +++II+ + V
Sbjct: 235 ASGMAPHAHL-----AIYKVCTRSRCSIMDIIAGLDAAV 268
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.133 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,478,327
Number of Sequences: 37544
Number of extensions: 433572
Number of successful extensions: 1130
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1122
Number of HSP's gapped (non-prelim): 23
length of query: 354
length of database: 14,793,348
effective HSP length: 83
effective length of query: 271
effective length of database: 11,677,196
effective search space: 3164520116
effective search space used: 3164520116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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