GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002033-TA|BGIBMGA002033-PA|IPR007110|Immunoglobulin-
like, IPR003599|Immunoglobulin subtype, IPR013098|Immunoglobulin I-set
         (354 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.59 
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        27   1.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   4.2  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    24   5.5  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   7.3  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 7   IRGTFVRIVRRSATLDI----HPQYDRWRHHVRAFILNTKSRAGAS--LDDRFVSTEEAG 60
           +R  F   V  S   DI      ++++  H VRAF+L   S +GAS  L+   V+T  + 
Sbjct: 58  LRKAFNETVDDSEAFDIMQKDRREFNKRSHEVRAFLLKNSSHSGASSGLNTTQVNTTISA 117

Query: 61  GVR 63
           G +
Sbjct: 118 GTQ 120


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 261 TSLGTYTCEAVNCMGRAYSSSKVHVVGRAS 290
           TS+G   C+ + C GR Y + +V VV R S
Sbjct: 47  TSIGVDGCDLM-CCGRGYRTQEVTVVERCS 75


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 279  SSSKVHVVGRASREGSLKPNSSGLSPEPPPIFTRELEDQYVR 320
            +S++ HV+     +G   P S+G  P+ PP   R    QY+R
Sbjct: 1216 TSNEAHVIANG-HDG---PVSAGKPPQAPPKAKRTTLGQYIR 1253


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 205 RPEFVEELRALLTEQGTVSLECKVVGVPT----PVLRWFKDSREIKAGDVFALTANAED 259
           RPE   EL  L+T QG    + + +  P      ++R + D  +  A +   + A   D
Sbjct: 132 RPEVFGELSGLITTQGETWQQLRTIVNPVMMQPKIIRLYVDQVDAVAREFMTIVAELRD 190


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)

Query: 94  LEVSAEESPSGEDPPTFLR 112
           LE  A E+   EDPP FLR
Sbjct: 754 LERQAIENIEAEDPPIFLR 772


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,302
Number of Sequences: 2123
Number of extensions: 13091
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 5
length of query: 354
length of database: 516,269
effective HSP length: 65
effective length of query: 289
effective length of database: 378,274
effective search space: 109321186
effective search space used: 109321186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)