Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002032-TA|BGIBMGA002032-PA|IPR008271|Serine/threonine
protein kinase, active site, IPR000719|Protein kinase,
IPR002290|Serine/threonine protein kinase, IPR001245|Tyrosine protein
kinase, IPR011009|Protein kinase-like
         (470 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   123   4e-30
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.               109   6e-26
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    85   2e-18
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    75   1e-15
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    73   5e-15
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    73   5e-15
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    52   1e-08
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   2.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   4.2  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    23   5.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   5.5  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      23   5.5  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  123 bits (296), Expect = 4e-30
 Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 7/219 (3%)

Query: 44  KLREKEETDIMHLRKLNHDNIVRFRGVCSEGENYCIIMEFCQYGPLYDFLHSG-ASFTPR 102
           K R    T+   + +  H N++  +GV ++     II EF + G L  FL +    F   
Sbjct: 676 KARNDFLTEASIMGQFEHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVL 735

Query: 103 QIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGTSREWDN--ESAVMS 160
           Q++   + IA GM YL     +HRDL + NVLV   LV K++DFG SRE ++  E A  +
Sbjct: 736 QLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTT 795

Query: 161 FTG--TVAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQ-EIPYKTLETHAILWGVGTET 217
             G   V W APE I     +   DVWS G+V WE+++  E PY       ++  +  + 
Sbjct: 796 RGGKIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSI-EKG 854

Query: 218 ILLPVPNSCPESLKLLLNQCWDRVPRNRPPFKIILAHLD 256
             LP P  CPE++  L+  CW +   +RP F  +   LD
Sbjct: 855 YRLPAPMDCPEAIYQLMLDCWQKERTHRPTFANLTQTLD 893


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score =  109 bits (261), Expect = 6e-26
 Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 8/242 (3%)

Query: 21  YLGSGAQGVVYSGNLRGEMVAVKKLREKEETDIMHLRK----LNHDNIVRFRGVCSEGEN 76
           +LGSG  G+VY    +GE VA K ++ ++ +++++  K    L H NIV+   +      
Sbjct: 72  FLGSGGFGIVYKALYKGEQVAAKIIQTEKYSNMLNSEKHASFLKHSNIVKVLMIEQGASL 131

Query: 77  YCIIMEFCQYGPLYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVA 136
             I ME C  G         A     + I   K I   + + HN  I+H D+K  N+L++
Sbjct: 132 SLITMELC--GTTLQNRLDEAILIKNERICILKSITCALQFCHNAGIVHADVKPKNILMS 189

Query: 137 DNLVAKVSDFGTSREWDNESAVMSFTGTVAWMAPEVIRHEPCSERVDVWSFGVVLWELLT 196
            N   K++DFG+S      + +  F GT  + APEVI+    +   D++S G+V W++L 
Sbjct: 190 KNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYSLGIVAWQMLF 249

Query: 197 QEIPYKTLETHAILW--GVGTETILLPVPNSCPESLKLLLNQCWDRVPRNRPPFKIILAH 254
           +++P+  L +H I++    G   I   + +    + K L  Q W +    RP    ++  
Sbjct: 250 RKLPFAGLHSHTIIYLSAKGHRPIDDNIDDEFKGTYKTLYKQMWSQNITERPTTNEVITK 309

Query: 255 LD 256
           +D
Sbjct: 310 ID 311


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 84.6 bits (200), Expect = 2e-18
 Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)

Query: 4   LSEEDWEVPFESITDMMYLGSGAQGVVYSGNLRGEMVAVKKLREKEETDIMHLRKLNH-- 61
           L+EE  ++  + +  +  LG G  G V    + G+      L++ ++  I+  R+  H  
Sbjct: 355 LNEEFRDLRLQDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIM 414

Query: 62  -----------DNIVRFRGVCSEGENYCIIMEFCQYGPLYDFLHSGASFTPRQIIRWAKD 110
                      D +V+      + +   ++ME C  G L+  L     F       +   
Sbjct: 415 SEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTAC 474

Query: 111 IAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGTSREWDNESAVMSFTGTVAWMAP 170
           + +   YLH+R II+RDLK  N+L+      K+ DFG ++  D+     +F GT  ++AP
Sbjct: 475 VVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAP 534

Query: 171 EVIRHEPCSERVDVWSFGVVLWELLTQEIPY 201
           EVI ++      D WS GV+++ELLT   P+
Sbjct: 535 EVILNKGHDISADYWSLGVLMFELLTGTPPF 565


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 74.9 bits (176), Expect = 1e-15
 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 6/152 (3%)

Query: 109 KDIAQGMVYLHNRKIIHRDLKSPNVLVADNL---VAKVSDFGTSREWDNES-AVMSFTGT 164
           + I + + + H+  ++HRDLK  N+L+A        K++DFG + E   E+ A   F GT
Sbjct: 16  QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGT 75

Query: 165 VAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQEIPYKTLETHAILWGVGTETILLPVP- 223
             +++PEV++ EP  + VD+W+ GV+L+ LL    P+   + H +   + T +   P P 
Sbjct: 76  PGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSPE 135

Query: 224 -NSCPESLKLLLNQCWDRVPRNRPPFKIILAH 254
            ++     K L+NQ     P  R      L H
Sbjct: 136 WDTVTPEAKNLINQMLTVNPSKRITASEALKH 167


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 72.9 bits (171), Expect = 5e-15
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 14/177 (7%)

Query: 89  LYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGT 148
           LY  + +G S+  R  I+ A D+ +G+ YLH++ ++HRD+K  NVL+     AK++DFG 
Sbjct: 686 LYCGIRAGLSWLER--IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF 743

Query: 149 SREWDNESAVMSFTGTVAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQEI--PYKTLET 206
                    + S  GT   MAPE++     S  VDV++FG++ W L    +  PY   + 
Sbjct: 744 C--ITEVMMLGSIVGTPVHMAPELLSGHYDSS-VDVYAFGILFWYLCAGHVRLPYTFEQF 800

Query: 207 H--AILW-GVGTETILLPV-PNSCP---ESLKLLLNQCWDRVPRNRPPFKIILAHLD 256
           H   +LW  V    +++ + P   P   +    L+ QCW   P  RP    I+  L+
Sbjct: 801 HNKELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLE 857


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 72.9 bits (171), Expect = 5e-15
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 14/177 (7%)

Query: 89  LYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGT 148
           LY  + +G S+  R  I+ A D+ +G+ YLH++ ++HRD+K  NVL+     AK++DFG 
Sbjct: 724 LYCGIRAGLSWLER--IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF 781

Query: 149 SREWDNESAVMSFTGTVAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQEI--PYKTLET 206
                    + S  GT   MAPE++     S  VDV++FG++ W L    +  PY   + 
Sbjct: 782 C--ITEVMMLGSIVGTPVHMAPELLSGHYDSS-VDVYAFGILFWYLCAGHVRLPYTFEQF 838

Query: 207 H--AILW-GVGTETILLPV-PNSCP---ESLKLLLNQCWDRVPRNRPPFKIILAHLD 256
           H   +LW  V    +++ + P   P   +    L+ QCW   P  RP    I+  L+
Sbjct: 839 HNKELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLE 895


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 52.0 bits (119), Expect = 1e-08
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 80  IMEFCQYGPLYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNL 139
           +ME+   G L   +     F     + +A +IA G+ +LH R I++RDLK  NVL+  + 
Sbjct: 63  VMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDG 122

Query: 140 VAKVSDFGTSREW-DNESAVMSFTGT 164
             K++DFG  +E    +    +F GT
Sbjct: 123 HIKIADFGMCKEGISGDKTTKTFCGT 148


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 435 TSVVERNGNIEE-TTCAFPFGSNDNYAPGQ 463
           +S+ +R G +E     AF FG+N  + PGQ
Sbjct: 39  SSLQQRRGGLEYFLLSAFLFGANALFTPGQ 68


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 157 AVMSFTGTVAWMAPEVIRHEPCSERVDVWSF 187
           A + +TG V+W  P + +   C   V+ + F
Sbjct: 138 ATLKYTGDVSWKPPAIYK-SSCEINVEYFPF 167


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 219 LLPVPNSCPESLKLLLNQCWDRVP 242
           ++ VP  CP   K + N+C   VP
Sbjct: 54  IIDVPPRCPPGSKFIKNRCRVIVP 77


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 275 ATWRKE--IENEMKEIYTRNKEKFEQAQKLQSVRREELRLARDTRLIYEQQLSRANEL 330
           A W +   ++    E+  +NKE  +    L+  RR    L     L YE  L+ +N +
Sbjct: 326 ACWNENRLLDRRNIEVVAKNKETLQAITGLKVKRRISFILVHGFPLEYEYVLAVSNRI 383


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 219 LLPVPNSCPESLKLLLNQCWDRVP 242
           ++ VP  CP   K + N+C   VP
Sbjct: 54  IIDVPPRCPPGSKFIKNRCRVIVP 77


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 157 AVMSFTGTVAWMAPEVIRHEPCSERVDVWSF 187
           A +++TG V W  P + +   C   V+ + F
Sbjct: 129 ATLNYTGRVEWKPPAIYK-SSCEIDVEYFPF 158


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,667
Number of Sequences: 429
Number of extensions: 7042
Number of successful extensions: 28
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 13
length of query: 470
length of database: 140,377
effective HSP length: 60
effective length of query: 410
effective length of database: 114,637
effective search space: 47001170
effective search space used: 47001170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)