Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002031-TA|BGIBMGA002031-PA|undefined
(129 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 29 0.17
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.23
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 27 0.70
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 27 0.70
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 0.92
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 26 2.1
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 25 2.8
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 2.8
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 25 2.8
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 4.9
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 25 4.9
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 25 4.9
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 24 6.5
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 24 6.5
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 24 6.5
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 24 6.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 24 6.5
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 24 8.6
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 29.5 bits (63), Expect = 0.17
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 36 SPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPK-QS 94
+P D+ E +LQ R+F+ + L TS S N+ S + + S K +S
Sbjct: 607 APEDFPIMPAESIHLFLQPRNFFKHNPALDTSSSVNSTSEATSPNTHHENLRDTSQKRES 666
Query: 95 HSTP 98
HSTP
Sbjct: 667 HSTP 670
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.23
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 54 SRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMS 100
S F + NT TSGSD+++ S S YT +S + S S
Sbjct: 969 SSGFQTVSNTTATSGSDDDVKTASTSSSTSYTSSSSSSSSTTSAASS 1015
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 27.5 bits (58), Expect = 0.70
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 52 LQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDN 111
++S+D SS ++ P SGS ++ + ++P+ S+S ++ S ++V +N
Sbjct: 231 IKSKDTVSSGDSTPLSGSSSSKGMLMSMSTSENHSLSSNPELSNSNLLAKNESPADVSNN 290
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 27.5 bits (58), Expect = 0.70
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 59 SSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPM 102
S+DN +P SGSD+ S+ S + + NS QS STP P+
Sbjct: 386 STDNKIPESGSDHP---SSQDNSSKASLVENSQTQS-STPRKPL 425
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 0.92
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 28 ALAEGRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSG-RYTG 86
ALA SD TI KP + + S+ ++P+S S N + + Y S T
Sbjct: 868 ALASNSESGASDVLSSTIAKPTFKFSTSNSGSTSYSIPSSSSRNEGT--TSYSSNITVTS 925
Query: 87 FGNSPKQSHSTPMSPMHSGSEVVDNTLAT 115
P + S + + S NTL+T
Sbjct: 926 STLKPSLTSSVSTASSYIASSASSNTLST 954
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 2.1
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 58 YSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSH---STPMSPMHSGSEVVD 110
Y + NT ++GS NN + S G+ +P ++ M PM S + V +
Sbjct: 76 YGASNTYGSNGSSNNYGNYGATNSNGDAGYSITPIRNDPYARKDMPPMKSSAAVTE 131
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 25.4 bits (53), Expect = 2.8
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 36 SPSDYKPETIEKPQEWLQSRDFYSS--DNTLPTSGS 69
S S K E +E+P+ +Q+ DFYS D T T S
Sbjct: 162 SSSITKQECMEEPKAVIQALDFYSKQLDTTSETKDS 197
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 2.8
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 54 SRDFYSSDNTLPTSG-------SDNNISYHSEYGSGR--YTGFGNSPKQSHSTPMSPMHS 104
S FYS+ + +PTS + +N SY + + T G + +T SP +S
Sbjct: 453 SPPFYSNSSVIPTSAPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGSATATSSSPYYS 512
Query: 105 GSE-VVDNTLATLASV 119
S +V T++T SV
Sbjct: 513 NSSIIVPTTVSTSGSV 528
Score = 23.8 bits (49), Expect = 8.6
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 52 LQSRDFYSSDNTLPTSGSDNNISYHSEYG-----------SGRYTGFGNSPKQSHSTPMS 100
+ S FYS+ + +PTS + S+ S S YTG G S+P
Sbjct: 289 VSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGSATFTSSP-- 346
Query: 101 PMHSGSEVVDNTLATLAS 118
P +S S V+ ++ + S
Sbjct: 347 PFYSNSSVIPTSVPSSVS 364
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 25.4 bits (53), Expect = 2.8
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 47 KPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTP-MSPMHSG 105
KPQE++ + Y+ N PT+ S+ S+H N ++P + P +S
Sbjct: 469 KPQEYVGVENDYNFSNNPPTAMSEQ--SFHPSVSQKPMDTPENGSNSFAASPYLQPYNSA 526
Query: 106 SEVVDNTLATL 116
S++ + + +L
Sbjct: 527 SQLAPSYVGSL 537
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 24.6 bits (51), Expect = 4.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 34 PWSPS--DYKPE-TIEKPQEWLQSRDFYSSDNTLPTSGSDN 71
PW+ D K + T+EK + SR S LPTS DN
Sbjct: 405 PWNMRYLDLKSDLTVEKKSDIYPSRARISISPMLPTSSEDN 445
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 24.6 bits (51), Expect = 4.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 36 SPSDYKPETIEKPQEWLQSRD 56
+P + P+ PQ W+ RD
Sbjct: 523 TPKSFNPKATPDPQRWIPKRD 543
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 24.6 bits (51), Expect = 4.9
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 26 IAALAEGRPWSPSDYKPETIEKPQEW-LQSRDFYSSDNTLPTSGSDN 71
IA ++ R + ++Y P+ + P W L+ D Y+ N S +N
Sbjct: 234 IAWASDKRRFLKTNYSPDDVAPPPNWVLRYPDGYTESNMPDLSTMEN 280
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 24.2 bits (50), Expect = 6.5
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 50 EWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMS 100
E QS DF +N D + + SGR + +SP S S+ S
Sbjct: 201 ECSQSEDFAEDENLYDELNLDEASASYDAERSGRSSSSSHSPSPSASSSSS 251
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 6.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 42 PETIEKPQEWLQSRDFYS 59
P T+ P+ W Q RD+ S
Sbjct: 222 PNTVPVPRHWNQKRDYLS 239
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 24.2 bits (50), Expect = 6.5
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 25 QIAALAEGRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSG---SDN--NISYHSEY 79
Q + + G+P P+ L ++ +T P+ G S+N N S S +
Sbjct: 9 QNSGFSFGKPAQPNSAAQGAATPAATGLFGNTNNNTSSTAPSGGLFGSNNASNTSAPSTF 68
Query: 80 GSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNT 112
G+ GNS S S+P S GS +NT
Sbjct: 69 SFGKAATTGNSTNASTSSPFS---FGSTNTNNT 98
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 24.2 bits (50), Expect = 6.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 58 YSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSP 91
+ + NT SGS NN S +GSG + ++P
Sbjct: 1070 FGAGNTPNPSGSINNASQAFAFGSGEPSNPASNP 1103
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 24.2 bits (50), Expect = 6.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 90 SPKQSHSTPMSPMHSGSEVVDNTLATLAS 118
S S S+P S + + SEVV +TL S
Sbjct: 485 SSSSSASSPQSTLSTSSEVVSEVSSTLLS 513
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 23.8 bits (49), Expect = 8.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 81 SGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLAT 115
SG TG + + T + ++SGSEV TLA+
Sbjct: 815 SGSVTGTVEVVEPAAGTVTTTVYSGSEVYTTTLAS 849
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.129 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,041
Number of Sequences: 5004
Number of extensions: 29804
Number of successful extensions: 75
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 22
length of query: 129
length of database: 2,362,478
effective HSP length: 66
effective length of query: 63
effective length of database: 2,032,214
effective search space: 128029482
effective search space used: 128029482
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)
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