Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002031-TA|BGIBMGA002031-PA|undefined
         (129 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   1.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   2.5  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   2.5  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    22   2.5  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   5.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   7.6  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 41  KPETIEKPQEWLQSRDFYSSDN 62
           +PET E  +EW    D Y+ +N
Sbjct: 268 QPETYELVKEWRDFVDNYAEEN 289


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 35  WSPSDYKPETIEKPQEWLQSRDFYSSDNTLP 65
           WS  DY  ++IE     +   DF  ++N LP
Sbjct: 160 WSTIDYTYDSIEARDSAIFDGDFI-TENNLP 189


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)

Query: 52  LQSRDFYSSDNTLPTSGSDN 71
           LQ R        LPTSGSDN
Sbjct: 103 LQERAQSVMGKCLPTSGSDN 122


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)

Query: 52  LQSRDFYSSDNTLPTSGSDN 71
           LQ R        LPTSGSDN
Sbjct: 103 LQERAQSVMGKCLPTSGSDN 122


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
          protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 18 VPICLILQIAALAEGRPWSPSDYKPETIEKPQ 49
          V  C +  ++A AE  P    DY P    + +
Sbjct: 7  VLFCAVAYVSAQAELEPEDTMDYIPTRFRRQE 38


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 80  GSGRYTGFGNSPKQSHSTPMSPMHSGSE 107
           GS  ++  G +  + HS   S  H GS+
Sbjct: 382 GSSVHSDSGENNSRGHSGQSSSHHHGSK 409


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.129    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,402
Number of Sequences: 429
Number of extensions: 2122
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 129
length of database: 140,377
effective HSP length: 51
effective length of query: 78
effective length of database: 118,498
effective search space:  9242844
effective search space used:  9242844
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
S2: 40 (20.2 bits)