Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002031-TA|BGIBMGA002031-PA|undefined
(129 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 31 0.22
02_05_0073 - 25602268-25603182,25603273-25604190 30 0.67
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 29 0.89
02_05_0982 - 33303500-33304011,33304091-33304208,33304606-333047... 29 1.6
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 29 1.6
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 28 2.1
11_02_0138 - 8708483-8709033,8709163-8709265,8709312-8709359,871... 28 2.1
08_01_0675 - 5840867-5841253,5842699-5842997,5844022-5844202 28 2.1
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 3.6
03_02_0404 - 8165211-8165318,8165397-8165733,8166031-8166242,816... 27 3.6
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 27 3.6
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 4.8
10_08_1012 - 22237330-22237740,22237980-22238180 27 4.8
08_01_0510 + 4455805-4456637,4457837-4457912 27 4.8
11_08_0099 + 28342765-28342872,28343016-28343167,28343461-283437... 27 6.3
04_04_1425 + 33463039-33463330,33464370-33464460,33465299-334656... 27 6.3
03_03_0244 - 15772156-15773964,15774190-15774711 27 6.3
09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23... 26 8.3
06_01_0898 + 6908826-6908974,6909059-6909428,6909510-6909929,691... 26 8.3
03_02_0312 - 7326092-7326148,7326415-7326540,7327744-7327821,732... 26 8.3
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 31.5 bits (68), Expect = 0.22
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 49 QEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSP 101
+ W Q+R SS L G + H +YG G + SP S + P++P
Sbjct: 32 KHWRQNRA--SSSTLLRRKGKGKTNNSHKQYGKGNQDPYQPSPSTSPNVPVNP 82
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 29.9 bits (64), Expect = 0.67
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 32 GRPWSPSDYKPETIEK-PQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNS 90
G PW+PS ++P ++E + W SR + D + GS ++ S R + +
Sbjct: 500 GNPWTPS-WEPNSVESTDRTWSASRSTNNGDEVV-EQGSSSHAGARSPLNRSRQSSKQRA 557
Query: 91 PKQSHSTPMSPMHSG 105
+ HS SG
Sbjct: 558 AQPEHSVRSRAGSSG 572
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 29.5 bits (63), Expect = 0.89
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 24 LQIAALAEGRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYG--- 80
+Q AA+ + R + P + +++ Q+ +YS+ PT + N YG
Sbjct: 609 MQFAAMPQPRMYGPQMSQYRLVQQ-----QAAQYYSNSQGRPTYYAGMNDLSQKMYGLSM 663
Query: 81 -SGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATLASVCLVGDTKA 127
Y G +SP + + S M S+ D L S+ KA
Sbjct: 664 QDSSYMGMNSSPYSTTPSSSSSMGQPSKPEDKLFGDLLSIAKTKQNKA 711
>02_05_0982 -
33303500-33304011,33304091-33304208,33304606-33304726,
33304811-33304877,33304968-33305102,33305186-33305297,
33305852-33306009,33306177-33306300,33306406-33306542,
33307284-33307403,33307878-33308025,33308674-33308931,
33309090-33309127,33309232-33309674,33309761-33309845,
33310063-33310123,33310277-33310453,33311611-33312408,
33314394-33314693
Length = 1303
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 53 QSRDFYSSDNTLPTSGSDNNISYHS--EYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVD 110
+S D SDN L T +D NI+ +S E+ +S T S MHS ++ VD
Sbjct: 504 ESEDGNVSDNILNTEDNDGNIANNSSEEFDDDVVLASLVHKSRSSKTKASKMHSSTKNVD 563
Query: 111 NT 112
+
Sbjct: 564 GS 565
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 41 KPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSE-YGSGRYTG 86
KP TI PQ+ D SD T P S+ +ISY+++ +G +TG
Sbjct: 186 KPATIILPQD-KTFFDAIDSDGTCPPWLSEEDISYYADKFGKTGFTG 231
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 31 EGRPWSPSDYKPETIEKPQEWLQS--RDFYSSDNTLPTSGSDNNISYHSEYG 80
EGR SP D +T+ P+ L + R++ + + T+ +G D + +H E G
Sbjct: 235 EGRSQSPIDINTKTVV-PRSDLDTLDRNYNAVNATIVNNGKDITMKFHGEVG 285
>11_02_0138 -
8708483-8709033,8709163-8709265,8709312-8709359,
8713887-8714359,8716353-8716508,8716572-8716617,
8716657-8716713
Length = 477
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 32 GRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSP 91
G W D+ +E E+L RDF + ++ + + + S YG G +P
Sbjct: 128 GARWYADDFNKSQLEAAGEFLSPRDFDGHGTHVASTAAGSVVRNVSFYGLASGIAQGGAP 187
Query: 92 K 92
K
Sbjct: 188 K 188
>08_01_0675 - 5840867-5841253,5842699-5842997,5844022-5844202
Length = 288
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 41 KPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSE 78
+P+ + ++W+ R FY + T+P+ S+ ++ +E
Sbjct: 153 EPQPLHLKEDWVLCRVFYKTRQTIPSPSSEEAVTLPNE 190
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 36 SPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTG-FGNSPKQS 94
S S P T ++ + L + D Y SD SY + YG G +SP +
Sbjct: 391 SHSQISPRTAKEDSDRLHASDLYRSDR------KSTGHSYEATYGKSPTRGATDSSPNKL 444
Query: 95 HSTPMSPM 102
HST M
Sbjct: 445 HSTEAHQM 452
>03_02_0404 -
8165211-8165318,8165397-8165733,8166031-8166242,
8166419-8166526,8166676-8166783,8166884-8166993,
8167122-8167228,8167349-8167566,8167674-8167841,
8168033-8168151,8168438-8168525,8168655-8168849,
8168968-8169271,8169363-8169480,8170034-8170133,
8170283-8170468
Length = 861
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 47 KPQEWL--QSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQS-HSTPMSPMH 103
K + W+ QS Y N P SG N+ +Y Y S + P Q+ + P S +
Sbjct: 664 KGEAWVNGQSIGRYWPTNLAPQSGCVNSCNYRGAYSSNKCLKKCGQPSQTLYHVPRSFLQ 723
Query: 104 SGS 106
GS
Sbjct: 724 PGS 726
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 17 HVPICLILQIAALAEGRPWSPSDYKPETIEKPQEWLQSRD 56
H ++L I ++ G P+D P IE +EW + RD
Sbjct: 117 HTVESIVLSIISMLSG----PNDESPANIEAAKEWREKRD 152
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 58 YSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATLA 117
Y N ++ DNN S + +Y FG S ++ S +SP + +L TL
Sbjct: 376 YMGPNQPQSNFVDNNSSPNGAMEGCKYLVFGESEQEQCSCRISPTRHVNINKLRSLVTLQ 435
Query: 118 SVC 120
++C
Sbjct: 436 NIC 438
>10_08_1012 - 22237330-22237740,22237980-22238180
Length = 203
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 62 NTLPTSGSDNNISYHSEYGSG 82
N L S SDNN+ H EY +G
Sbjct: 80 NLLDLSDSDNNLQPHHEYAAG 100
>08_01_0510 + 4455805-4456637,4457837-4457912
Length = 302
Score = 27.1 bits (57), Expect = 4.8
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 22 LILQIAALAEGRPWSPSDYKPETIEKPQEWLQSR 55
++ ++ +L +PWSP+D + + + K ++ LQ +
Sbjct: 244 MLKEVNSLDNTQPWSPNDDERQLVNKLRDTLQDK 277
>11_08_0099 +
28342765-28342872,28343016-28343167,28343461-28343705,
28343790-28343921,28344047-28344973,28345057-28345187
Length = 564
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 58 YSSDNTLPTSGSDNNISYHSEYGSGRY----TGFGNSPKQ-SHSTPMSPMHSGSEVVDNT 112
+ +D L T G N+ + G+GRY + F ++P Q + T + +H + V ++
Sbjct: 260 FKTDTLLITPGQTTNVLVRANQGAGRYLLSVSPFMDAPVQVDNKTGTATLHY-ANTVSSS 318
Query: 113 LATLASV 119
+A+L V
Sbjct: 319 MASLTLV 325
>04_04_1425 +
33463039-33463330,33464370-33464460,33465299-33465656,
33465771-33465944,33466403-33466607,33466717-33466784,
33467279-33467360,33467513-33467549,33467822-33467913,
33469219-33469294,33469402-33469585,33469859-33469867
Length = 555
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 47 KPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMS 100
K +++ + + +D ++ +SG+D + + G G P HS+P++
Sbjct: 339 KVRQYGSTSRLFENDTSIFSSGTDKKVDKPEQNNKGSDKVAGAEPANGHSSPIT 392
>03_03_0244 - 15772156-15773964,15774190-15774711
Length = 776
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 42 PETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGS 81
P+T+ K + +S D LPTS S ++ SE GS
Sbjct: 58 PDTVSKLKPAQESDDSLKDKTDLPTSTSKTEVNNISENGS 97
>09_01_0008 -
233137-233279,233712-233827,235376-235720,236218-236292,
236508-236636,237516-237589,237836-237968,239366-239584,
239671-239756,239843-241107,241304-241640,242548-242862,
243614-243697,243776-243883,243981-244079
Length = 1175
Score = 26.2 bits (55), Expect = 8.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 27 AALAEGRPWSPSDYKPETIEKPQEWLQSRDFYSS 60
A +A G P S +DY P T E+ W+ R SS
Sbjct: 847 AHVARGDPRSSTDYGPPTRERSGIWVAPRFSKSS 880
>06_01_0898 +
6908826-6908974,6909059-6909428,6909510-6909929,
6910017-6910315,6910390-6910648,6910732-6911041,
6911126-6911251,6911373-6911417,6911652-6911702,
6912041-6912153
Length = 713
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 73 ISYHSEYGSGRYTGFGNSPKQSHSTPMSPMH 103
+S +E+ G TG G+S + S +TP S H
Sbjct: 632 VSIGNEFIPGGSTGVGSSAQGSQTTPTSDCH 662
>03_02_0312 -
7326092-7326148,7326415-7326540,7327744-7327821,
7327916-7328178,7328699-7328741,7329581-7329632,
7329705-7329871,7330135-7330194,7330291-7330374,
7330654-7330758,7330840-7330899,7330976-7331032
Length = 383
Score = 26.2 bits (55), Expect = 8.3
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 65 PTSGSDNNISYHSEYGSGRYT-GFGNSPKQSHSTPMSPMHSGSEVVDNTLATLAS 118
P++ S N S HSE GSG + G + K T H N AT S
Sbjct: 166 PSASSSNEGSSHSESGSGSSSEGSSTNSKSGSRTKDGSEHGQGNDASNKGATAQS 220
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.129 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,292,222
Number of Sequences: 37544
Number of extensions: 187633
Number of successful extensions: 422
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 20
length of query: 129
length of database: 14,793,348
effective HSP length: 74
effective length of query: 55
effective length of database: 12,015,092
effective search space: 660830060
effective search space used: 660830060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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