Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002031-TA|BGIBMGA002031-PA|undefined
(129 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z75711-8|CAJ43907.1| 118|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 27 3.2
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 27 3.2
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 27 3.2
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 27 5.5
Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z50797-8|CAL36515.1| 291|Caenorhabditis elegans Hypothetical pr... 27 5.5
AF016654-7|AAB66029.2| 324|Caenorhabditis elegans Nuclear hormo... 27 5.5
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 27 5.5
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 26 7.3
Z81094-6|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 26 9.6
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z48241-8|CAD44101.1| 589|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z36237-4|CAD44107.1| 589|Caenorhabditis elegans Hypothetical pr... 26 9.6
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 26 9.6
U40799-5|AAA81483.2| 174|Caenorhabditis elegans Hypothetical pr... 26 9.6
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 26 9.6
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 26 9.6
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 29.1 bits (62), Expect = 1.0
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 20/90 (22%)
Query: 25 QIAALAEGRPWSPS-----DYKPETI------EKPQEWLQSRD----FYSSDNTLPTSGS 69
++A AEGR WS S +Y P T+ KP +Y +++ S
Sbjct: 114 KVACEAEGREWSQSTSPAANYVPPTLGGMSSQSKPTNKSSGNSSLGSYYGGNSSYSQSTG 173
Query: 70 DNNISYHSEYGSGRYTGFGNS---PKQSHS 96
D +Y ++ + +Y GFGN+ P QS+S
Sbjct: 174 DG--AYSTQDSNSKYQGFGNTGYVPNQSNS 201
>Z75711-8|CAJ43907.1| 118|Caenorhabditis elegans Hypothetical
protein K02B12.9 protein.
Length = 118
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/93 (22%), Positives = 32/93 (34%)
Query: 14 IFPHVPICLILQIAALAEGRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNI 73
+F + IC +A G + +KP + +S Y S +
Sbjct: 5 LFLVLVICATTALAMFDHGPKYGSHQFKPVYLSPYGSKYESYGKYDDHKDSHYQPSYYHD 64
Query: 74 SYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGS 106
SY +Y SG GN S+ P + GS
Sbjct: 65 SYEPKYNSGHDQKSGNDYYSSYQPSHQPYYGGS 97
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 52 LQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSE 107
+ +R++ SS ++ P G NN Y S+ G G G G SP P S GS+
Sbjct: 110 IPARNYESSSSSAPVYG--NN--YGSQGGGGGCCGCGQSPPGPPGRPGSDGSPGSD 161
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 54 SRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSP 101
++ + SS +T+P++ S N+ +HS GS G +P PMSP
Sbjct: 958 TQSYGSSISTMPSTSSRGNVQHHS--GSA-VRGQSITPTGLSQVPMSP 1002
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 54 SRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSP 101
++ + SS +T+P++ S N+ +HS GS G +P PMSP
Sbjct: 992 TQSYGSSISTMPSTSSRGNVQHHS--GSA-VRGQSITPTGLSQVPMSP 1036
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 77 SEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATLASVCL 121
+++G+ +GFG QS TP SP S + N A + L
Sbjct: 385 AQFGAMSSSGFGGMSMQSKPTPTSPTGSQGFNIPNKSNAFADLAL 429
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein
T22H6.6a protein.
Length = 1405
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 66 TSGSDNNISYHSEYGSGR-YTGFGNSPKQSHSTPMSPMHSG 105
T G D +I + + + + + N QS TPM+PM SG
Sbjct: 1250 TPGQDQSIFFGANFNPDQQFLSRDNVTPQSACTPMTPMMSG 1290
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 66 TSGSDNNISYHSEYGSGR-YTGFGNSPKQSHSTPMSPMHSG 105
T G D +I + + + + + N QS TPM+PM SG
Sbjct: 1250 TPGQDQSIFFGANFNPDQQFLSRDNVTPQSACTPMTPMMSG 1290
>Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical
protein T22H6.6b protein.
Length = 640
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 66 TSGSDNNISYHSEYGSGR-YTGFGNSPKQSHSTPMSPMHSG 105
T G D +I + + + + + N QS TPM+PM SG
Sbjct: 485 TPGQDQSIFFGANFNPDQQFLSRDNVTPQSACTPMTPMMSG 525
>Z50797-8|CAL36515.1| 291|Caenorhabditis elegans Hypothetical
protein T22H6.6c protein.
Length = 291
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 66 TSGSDNNISYHSEYGSGR-YTGFGNSPKQSHSTPMSPMHSG 105
T G D +I + + + + + N QS TPM+PM SG
Sbjct: 136 TPGQDQSIFFGANFNPDQQFLSRDNVTPQSACTPMTPMMSG 176
>AF016654-7|AAB66029.2| 324|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 72 protein.
Length = 324
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 59 SSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSH 95
SS ++P+SGS N+ S Y+GF K H
Sbjct: 79 SSQRSIPSSGSSNSSSTSRSNSPQTYSGFSKILKIHH 115
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 59 SSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSP 101
SS +T+P++ S N+ +HS GS G +P PMSP
Sbjct: 672 SSISTMPSTSSRGNVQHHS--GSA-VRGQSITPTGLSQVPMSP 711
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 26.2 bits (55), Expect = 7.3
Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 37 PSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHS 96
P YK T P + + DF + + + S+++ S R T FG P H
Sbjct: 218 PQSYKQPTHPSPSQ--RETDFLRNLQRQKAEAHNMSSSWYAGDQSSRQTDFGTLPSPQHY 275
Query: 97 TPMSPMH 103
S H
Sbjct: 276 NSNSSDH 282
>Z81094-6|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 54 SRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVV 109
SR SS + P G D+NI YG G ++ + +S P+S + G++++
Sbjct: 558 SRSSSSSRKSSPERGRDSNIGQRG-YGGGGFSERPSFGFKSAQEPLSYDNKGAQLM 612
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 62 NTLPTSGSDNNISYHSE--YGSGRYTGFGNSPKQSHSTPM 99
NT +S + + ++HS SG Y G SP H+ P+
Sbjct: 155 NTNTSSSNHQSSTFHSSSHQSSGNYGSGGFSPSSHHNIPI 194
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 62 NTLPTSGSDNNISYHSE--YGSGRYTGFGNSPKQSHSTPM 99
NT +S + + ++HS SG Y G SP H+ P+
Sbjct: 155 NTNTSSSNHQSSTFHSSSHQSSGNYGSGGFSPSSHHNIPI 194
>Z48241-8|CAD44101.1| 589|Caenorhabditis elegans Hypothetical
protein C48D5.2c protein.
Length = 589
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 66 TSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATL 116
TS N+++ +S + S G G SP +S +P S S S V ++ + T+
Sbjct: 135 TSSPRNSVASYSSFASA---GIGGSPPRSKRSPQS-NKSSSPVGEDQVVTI 181
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 66 TSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATL 116
TS N+++ +S + S G G SP +S +P S S S V ++ + T+
Sbjct: 572 TSSPRNSVASYSSFASA---GIGGSPPRSKRSPQS-NKSSSPVGEDQVVTI 618
>Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical
protein C48D5.2b protein.
Length = 624
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 66 TSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATL 116
TS N+++ +S + S G G SP +S +P S S S V ++ + T+
Sbjct: 170 TSSPRNSVASYSSFASA---GIGGSPPRSKRSPQS-NKSSSPVGEDQVVTI 216
>Z36237-4|CAD44107.1| 589|Caenorhabditis elegans Hypothetical
protein C48D5.2c protein.
Length = 589
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 66 TSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATL 116
TS N+++ +S + S G G SP +S +P S S S V ++ + T+
Sbjct: 135 TSSPRNSVASYSSFASA---GIGGSPPRSKRSPQS-NKSSSPVGEDQVVTI 181
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 66 TSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVVDNTLATL 116
TS N+++ +S + S G G SP +S +P S S S V ++ + T+
Sbjct: 572 TSSPRNSVASYSSFASA---GIGGSPPRSKRSPQS-NKSSSPVGEDQVVTI 618
>U40799-5|AAA81483.2| 174|Caenorhabditis elegans Hypothetical
protein F42C5.6 protein.
Length = 174
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 10 WLLIIFPHVPICLILQIAALAEGRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGS 69
W++I+ +PICL+L + R S +P T P + R + D+T S
Sbjct: 110 WIVIMIIVLPICLVLPASTFLIRRILCSSSQQP-TGRAPSAADRVRQLAAEDSTTFRRDS 168
Query: 70 DNNI 73
D+ +
Sbjct: 169 DDMV 172
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 54 SRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSPKQSHSTPMSPMHSGSEVV 109
SR SS + P G D+NI YG G ++ + +S P+S + G++++
Sbjct: 558 SRSSSSSRKSSPERGRDSNIGQRG-YGGGGFSERPSFGFKSAQEPLSYDNKGAQLM 612
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 57 FYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSP 91
F++ TLP S + S E SG + G NSP
Sbjct: 1171 FFADHATLPFSNENTPKSDKKEAKSGWFKGIANSP 1205
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.129 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,607,267
Number of Sequences: 27539
Number of extensions: 158989
Number of successful extensions: 365
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 361
Number of HSP's gapped (non-prelim): 24
length of query: 129
length of database: 12,573,161
effective HSP length: 74
effective length of query: 55
effective length of database: 10,535,275
effective search space: 579440125
effective search space used: 579440125
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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