GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002030-TA|BGIBMGA002030-PA|IPR001164|Arf GTPase
activating protein
         (124 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    22   5.4  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    22   5.4  

>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
          protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 48 VHRSLGVHLSFVRSVTMDKWKDVELEKMMVGG 79
          VH S  V +S+V + T DK K    +  ++GG
Sbjct: 36 VHASYAVAISYVLADTADKSKKQYDKPEILGG 67


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
          protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 48 VHRSLGVHLSFVRSVTMDKWKDVELEKMMVGG 79
          VH S  V +S+V + T DK K    +  ++GG
Sbjct: 36 VHASYAVAISYVLADTADKSKKQYDKPEILGG 67


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.132    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,190
Number of Sequences: 2123
Number of extensions: 5429
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 124
length of database: 516,269
effective HSP length: 57
effective length of query: 67
effective length of database: 395,258
effective search space: 26482286
effective search space used: 26482286
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)