Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002030-TA|BGIBMGA002030-PA|IPR001164|Arf GTPase
activating protein
(124 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 180 3e-46
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 112 8e-26
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 85 1e-17
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 81 3e-16
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 81 3e-16
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 81 3e-16
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 81 3e-16
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 81 3e-16
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 76 6e-15
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 76 6e-15
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 76 6e-15
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 76 6e-15
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 31 0.31
AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 27 3.9
AL132951-3|CAD56257.1| 169|Caenorhabditis elegans Hypothetical ... 26 6.8
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 26 6.8
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 180 bits (438), Expect = 3e-46
Identities = 78/116 (67%), Positives = 93/116 (80%)
Query: 1 MASPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVR 60
MASPRT+R L +R D+N+ CFEC NPQWVSV+YG+WICLECSG+HRSLGVHLSFVR
Sbjct: 1 MASPRTRRVLKELRPCDDNNFCFECEANNPQWVSVSYGIWICLECSGIHRSLGVHLSFVR 60
Query: 61 SVTMDKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQKVS 116
SVTMDKWKD+EL KM GGN K EF +SQPD TI +KYN++AAA++R KV+
Sbjct: 61 SVTMDKWKDIELAKMKAGGNRKFAEFLQSQPDYKEKWTIQEKYNSRAAALFRDKVA 116
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 112 bits (269), Expect = 8e-26
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 10 LNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMD-KWK 68
+ +R L N CF+CG NP W +VTYGV++C++CS VHR+LGVHL+FVRS +D W
Sbjct: 16 MRKMRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVRSTNLDTNWT 75
Query: 69 DVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQKVS 116
++L M +GGN A +FF++ + QKY ++AA MYR K+S
Sbjct: 76 WLQLRAMQLGGNGNANQFFKAHG--CNTTEAQQKYKSRAAQMYRDKLS 121
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 85.4 bits (202), Expect = 1e-17
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 17 DENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVELEKMM 76
+EN C +C P+W + GV+IC+ C+G+HR+LGVH+S VRSV +D W +++ M
Sbjct: 27 EENKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISKVRSVNLDSWTPEQVQTMR 86
Query: 77 VGGNAKAREFFESQ-PDISSGMTIPQKYNTKAAAMYRQKVSHFTDF 121
V GN KAR+ +E P T Q+ + Y QK DF
Sbjct: 87 VMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKYEQKRYILRDF 132
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 80.6 bits (190), Expect = 3e-16
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 12 SIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVE 71
++R++ N +C +CG + +W S+ G+ IC+ECSG+HR+LG H+S VR + +D+W
Sbjct: 623 ALRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEH 682
Query: 72 LEKMMVGGNAKAREFFE 88
L M GN KA E +E
Sbjct: 683 LAVMQAIGNDKANEMWE 699
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 80.6 bits (190), Expect = 3e-16
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 12 SIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVE 71
++R++ N +C +CG + +W S+ G+ IC+ECSG+HR+LG H+S VR + +D+W
Sbjct: 671 ALRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEH 730
Query: 72 LEKMMVGGNAKAREFFE 88
L M GN KA E +E
Sbjct: 731 LAVMQAIGNDKANEMWE 747
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 80.6 bits (190), Expect = 3e-16
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 12 SIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVE 71
++R++ N +C +CG + +W S+ G+ IC+ECSG+HR+LG H+S VR + +D+W
Sbjct: 827 ALRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEH 886
Query: 72 LEKMMVGGNAKAREFFE 88
L M GN KA E +E
Sbjct: 887 LAVMQAIGNDKANEMWE 903
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 80.6 bits (190), Expect = 3e-16
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 12 SIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVE 71
++R++ N +C +CG + +W S+ G+ IC+ECSG+HR+LG H+S VR + +D+W
Sbjct: 827 ALRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEH 886
Query: 72 LEKMMVGGNAKAREFFE 88
L M GN KA E +E
Sbjct: 887 LAVMQAIGNDKANEMWE 903
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 80.6 bits (190), Expect = 3e-16
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 12 SIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVE 71
++R++ N +C +CG + +W S+ G+ IC+ECSG+HR+LG H+S VR + +D+W
Sbjct: 672 ALRSIPGNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEH 731
Query: 72 LEKMMVGGNAKAREFFE 88
L M GN KA E +E
Sbjct: 732 LAVMQAIGNDKANEMWE 748
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 76.2 bits (179), Expect = 6e-15
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 13 IRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVEL 72
+R + N C +CG+ P+WVS+ GV +C+ECSG HRSLGV S VRS+ MD +
Sbjct: 369 VRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELR 428
Query: 73 EKMMVGGNAKAREFFESQ-PDISSGMTIPQKYNTKAAAMYRQ 113
+ ++ GN + E F + P S +P + N K+A R+
Sbjct: 429 DVLLALGNRQVNEIFLAHLPPADS--IVPPQINEKSARPARE 468
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 76.2 bits (179), Expect = 6e-15
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 13 IRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVEL 72
+R + N C +CG+ P+WVS+ GV +C+ECSG HRSLGV S VRS+ MD +
Sbjct: 453 VRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELR 512
Query: 73 EKMMVGGNAKAREFFESQ-PDISSGMTIPQKYNTKAAAMYRQ 113
+ ++ GN + E F + P S +P + N K+A R+
Sbjct: 513 DVLLALGNRQVNEIFLAHLPPADS--IVPPQINEKSARPARE 552
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 76.2 bits (179), Expect = 6e-15
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 13 IRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVEL 72
+R + N C +CG+ P+WVS+ GV +C+ECSG HRSLGV S VRS+ MD +
Sbjct: 369 VRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELR 428
Query: 73 EKMMVGGNAKAREFFESQ-PDISSGMTIPQKYNTKAAAMYRQ 113
+ ++ GN + E F + P S +P + N K+A R+
Sbjct: 429 DVLLALGNRQVNEIFLAHLPPADS--IVPPQINEKSARPARE 468
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 76.2 bits (179), Expect = 6e-15
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 13 IRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVEL 72
+R + N C +CG+ P+WVS+ GV +C+ECSG HRSLGV S VRS+ MD +
Sbjct: 453 VRRVPGNEVCADCGSPAPKWVSINLGVVLCIECSGAHRSLGVQTSKVRSLCMDSIDNELR 512
Query: 73 EKMMVGGNAKAREFFESQ-PDISSGMTIPQKYNTKAAAMYRQ 113
+ ++ GN + E F + P S +P + N K+A R+
Sbjct: 513 DVLLALGNRQVNEIFLAHLPPADS--IVPPQINEKSARPARE 552
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 6 TKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMD 65
T L+ I +L++ +C +CG +W SV G IC EC H LG +S++R +
Sbjct: 3 TAEALDLITSLEQK-ECDDCGKKEVEWASVKKGTVICSECFCFHSYLGPSVSYLRHLRKS 61
Query: 66 KWKDVELEKMMVGGNAKAREFFES 89
W + + + + +ES
Sbjct: 62 AWDEEHIRLVHALNTSNTNMIWES 85
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
F20C5.2b protein.
Length = 1130
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 3 SPRTKRKLNSIRNL-DENHKCFEC 25
+PRT+RKL S+R L D N K F+C
Sbjct: 1050 TPRTRRKLISVRRLKDRNRKKFKC 1073
>AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.2 protein.
Length = 355
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 12 SIRNLDENHKCFECGTLNPQWVSVTYGVWICLECS 46
++ N E ++ C LN WV +T G W C+
Sbjct: 306 AVYNYIERYQHGACLLLNVNWVYITDGAWYTERCT 340
>AL132951-3|CAD56257.1| 169|Caenorhabditis elegans Hypothetical
protein Y67H2A.4b protein.
Length = 169
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 52 LGVHLSFVRSVTM-DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAM 110
L +H SF+R + + + K + + + + AK E E Q D + +KY
Sbjct: 27 LMLHCSFLRVIPIKNASKRLIIVRSLTSAPAKTSEA-EKQQDSLKNIDAGEKYTALGNIR 85
Query: 111 YRQKVSHFTD 120
++ V H+TD
Sbjct: 86 QKKDVFHYTD 95
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 52 LGVHLSFVRSVTM-DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAM 110
L +H SF+R + + + K + + + + AK E E Q D + +KY
Sbjct: 27 LMLHCSFLRVIPIKNASKRLIIVRSLTSAPAKTSEA-EKQQDSLKNIDAGEKYTALGNIR 85
Query: 111 YRQKVSHFTD 120
++ V H+TD
Sbjct: 86 QKKDVFHYTD 95
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.132 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,174,737
Number of Sequences: 27539
Number of extensions: 113362
Number of successful extensions: 271
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 255
Number of HSP's gapped (non-prelim): 17
length of query: 124
length of database: 12,573,161
effective HSP length: 73
effective length of query: 51
effective length of database: 10,562,814
effective search space: 538703514
effective search space used: 538703514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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