GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002029-TA|BGIBMGA002029-PA|IPR004701|Phosphotransferase
system, fructose subfamily IIA component, IPR013919|Peroxisome
membrane protein, Pex16
         (270 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   4.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   4.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   4.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   4.2  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 207 ISRRKLGLVLYLLRSPMYNKYSNTVIE 233
           I RR+  L+  +LR    NKY   +++
Sbjct: 478 ILRRRFALINSILRKLYKNKYRKLIVD 504


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/27 (25%), Positives = 17/27 (62%)

Query: 17  WVISNPSVVTDVETVATWTSYFVAELI 43
           ++ISNP +   V  +  W+++F+  ++
Sbjct: 258 YLISNPIMWDRVMLLTFWSAFFIVNVL 284


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 72 LYRFKELPISHPPV 85
          +YRF+ +P + PPV
Sbjct: 39 VYRFEGIPYAQPPV 52


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 72 LYRFKELPISHPPV 85
          +YRF+ +P + PPV
Sbjct: 39 VYRFEGIPYAQPPV 52


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 72 LYRFKELPISHPPV 85
          +YRF+ +P + PPV
Sbjct: 39 VYRFEGIPYAQPPV 52


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 72 LYRFKELPISHPPV 85
          +YRF+ +P + PPV
Sbjct: 39 VYRFEGIPYAQPPV 52


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
          protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 72 LYRFKELPISHPPV 85
          +YRF+ +P + PPV
Sbjct: 39 VYRFEGIPYAQPPV 52


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,193
Number of Sequences: 317
Number of extensions: 2627
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 7
length of query: 270
length of database: 114,650
effective HSP length: 56
effective length of query: 214
effective length of database: 96,898
effective search space: 20736172
effective search space used: 20736172
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)