Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002028-TA|BGIBMGA002028-PA|undefined
         (226 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-571|AAF47722.1|  556|Drosophila melanogaster CG14956-PA...   110   1e-24
AY553965-1|AAS90559.1|  748|Drosophila melanogaster thisbe protein.    31   0.99 
AE013599-1345|AAF58621.2|  748|Drosophila melanogaster CG12443-P...    31   0.99 

>AE014296-571|AAF47722.1|  556|Drosophila melanogaster CG14956-PA
           protein.
          Length = 556

 Score =  110 bits (265), Expect = 1e-24
 Identities = 43/66 (65%), Positives = 51/66 (77%)

Query: 160 RARHTPAVRSGPPLSCNFCWNTVDECGRILRRKTQYHCPECRTNLCIVPCFHEYHDNPDA 219
           R+ H P +R GP L CNFCWNT+D  GRILRRKT+YHCPEC+TNLCIVPCF EYH+  + 
Sbjct: 440 RSSHCPVIRPGPALGCNFCWNTIDGHGRILRRKTKYHCPECQTNLCIVPCFQEYHERLNN 499

Query: 220 EPGAGA 225
           E  A +
Sbjct: 500 EAAAAS 505


>AY553965-1|AAS90559.1|  748|Drosophila melanogaster thisbe protein.
          Length = 748

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 67  DPGLKLRRSKHFKRQNRVADDRDMRKQCSEPAVSTPPLP 105
           DP L LRR +H K+Q R    +  + Q    A  T P+P
Sbjct: 256 DPSLLLRRQQHEKKQKRRKQQKQQQHQQRVSASPTNPMP 294


>AE013599-1345|AAF58621.2|  748|Drosophila melanogaster CG12443-PA
           protein.
          Length = 748

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 67  DPGLKLRRSKHFKRQNRVADDRDMRKQCSEPAVSTPPLP 105
           DP L LRR +H K+Q R    +  + Q    A  T P+P
Sbjct: 256 DPSLLLRRQQHEKKQKRRKQQKQQQHQQRVSASPTNPMP 294


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.136    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,240,079
Number of Sequences: 52641
Number of extensions: 419714
Number of successful extensions: 1101
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1098
Number of HSP's gapped (non-prelim): 3
length of query: 226
length of database: 24,830,863
effective HSP length: 82
effective length of query: 144
effective length of database: 20,514,301
effective search space: 2954059344
effective search space used: 2954059344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)