GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002028-TA|BGIBMGA002028-PA|undefined
         (226 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 107 LQKHESYPQYATKEREVGSLLIR 129
           L +HE++  +  K R+V   LIR
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIR 96


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query: 175 CNFCWNTVDE 184
           CN C+NTV+E
Sbjct: 287 CNQCYNTVEE 296


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 59  NFEKSIKVDPGLKLRR 74
           NF K I+V P ++LRR
Sbjct: 776 NFTKLIQVVPTMELRR 791


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,521
Number of Sequences: 317
Number of extensions: 1842
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 226
length of database: 114,650
effective HSP length: 55
effective length of query: 171
effective length of database: 97,215
effective search space: 16623765
effective search space used: 16623765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)