GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002028-TA|BGIBMGA002028-PA|undefined
         (226 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450 pr...    24   3.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.8  

>AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450
          protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)

Query: 7  EIVNAVGSNWCALSL 21
          EIVN +G+++C LSL
Sbjct: 10 EIVNEIGADFCELSL 24


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 91  RKQCSEPAVSTPP 103
           RK  S PAV+TPP
Sbjct: 557 RKATSPPAVATPP 569


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,941
Number of Sequences: 2123
Number of extensions: 8590
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 226
length of database: 516,269
effective HSP length: 62
effective length of query: 164
effective length of database: 384,643
effective search space: 63081452
effective search space used: 63081452
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)