Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002027-TA|BGIBMGA002027-PA|IPR007889|Helix-turn-helix,
Psq, IPR011526|Helix-turn-helix, Psq-like
(273 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051895-1|AAK93319.1| 743|Drosophila melanogaster LD38452p pro... 112 4e-25
AE014296-570|AAN11533.1| 743|Drosophila melanogaster CG11494-PB... 112 4e-25
AE014296-569|AAF47721.2| 743|Drosophila melanogaster CG11494-PA... 112 4e-25
X90986-3|CAA62475.1| 660|Drosophila melanogaster pipsqueak prot... 36 0.060
X90986-2|CAA62474.1| 1085|Drosophila melanogaster pipsqueak prot... 36 0.060
U48402-1|AAC47154.1| 646|Drosophila melanogaster PsqB protein. 36 0.060
U48358-1|AAC47153.1| 1065|Drosophila melanogaster PsqA protein. 36 0.060
AY069588-1|AAL39733.1| 1064|Drosophila melanogaster LD33470p pro... 36 0.060
AE013599-1152|AAX52714.1| 639|Drosophila melanogaster CG2368-PK... 36 0.060
AE013599-1151|AAX52713.1| 639|Drosophila melanogaster CG2368-PJ... 36 0.060
AE013599-1150|AAX52712.1| 639|Drosophila melanogaster CG2368-PI... 36 0.060
AE013599-1149|AAO41434.1| 645|Drosophila melanogaster CG2368-PH... 36 0.060
AE013599-1148|AAO41433.1| 645|Drosophila melanogaster CG2368-PG... 36 0.060
AE013599-1147|AAO41432.1| 645|Drosophila melanogaster CG2368-PF... 36 0.060
AE013599-1146|AAM68770.1| 645|Drosophila melanogaster CG2368-PE... 36 0.060
AE013599-1145|AAM68769.1| 645|Drosophila melanogaster CG2368-PD... 36 0.060
AE013599-1143|AAF58770.1| 1046|Drosophila melanogaster CG2368-PA... 36 0.060
AE013599-1142|AAS64878.1| 1064|Drosophila melanogaster CG2368-PC... 36 0.060
AE013599-1141|AAF58769.1| 1064|Drosophila melanogaster CG2368-PB... 36 0.060
BT003272-1|AAO25029.1| 1109|Drosophila melanogaster LD16921p pro... 31 1.3
AE014296-1852|AAF50133.2| 1149|Drosophila melanogaster CG7958-PB... 31 1.3
AE014296-1851|AAF50134.3| 1135|Drosophila melanogaster CG7958-PA... 31 1.3
S64530-1|AAB27802.2| 180|Drosophila melanogaster defective chor... 31 2.3
S64529-1|AAB27801.2| 206|Drosophila melanogaster defective chor... 31 2.3
M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chor... 31 2.3
M35888-1|AAA28447.1| 950|Drosophila melanogaster defective chor... 31 2.3
M35887-1|AAA28446.1| 1123|Drosophila melanogaster defective chor... 31 2.3
AE014298-1067|AAN09216.1| 950|Drosophila melanogaster CG2175-PC... 31 2.3
AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA... 31 2.3
AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB... 31 2.3
X76231-1|CAA53816.1| 172|Drosophila melanogaster fc proteins pr... 30 3.9
S64532-1|AAB27804.2| 154|Drosophila melanogaster defective chor... 30 3.9
S64531-1|AAB27803.2| 180|Drosophila melanogaster defective chor... 30 3.9
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 29 6.9
>AY051895-1|AAK93319.1| 743|Drosophila melanogaster LD38452p
protein.
Length = 743
Score = 112 bits (270), Expect = 4e-25
Identities = 63/184 (34%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 27 VPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGMDANTGGIQQGAQWSMMEHTYPRYTNA 86
V +R+ + + QQ Q + Q A+ G +Q + + Y A
Sbjct: 431 VNSDQRQQHEAQQQATQQQQHLQQLHYQQQQQQEQASASGQAYSSQIITVNNLVGSYATA 490
Query: 87 CIGSAGLQPEAGMYMNNVMEHHMEGEMNEYAQGLGVGPSXXXXXXXXXXXXXXX--XXXX 144
+ P + +V + G+G +
Sbjct: 491 AQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGVGGASAAGGAAGNASAGNGGAPGAANQ 550
Query: 145 XXKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSI 204
KR+R+ NPQ +ENF RALEAVR GGIGFCKAAR++GVNNRTLWLEYKK+GYP +RPSI
Sbjct: 551 VVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSI 610
Query: 205 KSRI 208
K+R+
Sbjct: 611 KARV 614
>AE014296-570|AAN11533.1| 743|Drosophila melanogaster CG11494-PB,
isoform B protein.
Length = 743
Score = 112 bits (270), Expect = 4e-25
Identities = 63/184 (34%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 27 VPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGMDANTGGIQQGAQWSMMEHTYPRYTNA 86
V +R+ + + QQ Q + Q A+ G +Q + + Y A
Sbjct: 431 VNSDQRQQHEAQQQATQQQQHLQQLHYQQQQQQEQASASGQAYSSQIITVNNLVGSYATA 490
Query: 87 CIGSAGLQPEAGMYMNNVMEHHMEGEMNEYAQGLGVGPSXXXXXXXXXXXXXXX--XXXX 144
+ P + +V + G+G +
Sbjct: 491 AQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGVGGASAAGGAAGNASAGNGGAPGAANQ 550
Query: 145 XXKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSI 204
KR+R+ NPQ +ENF RALEAVR GGIGFCKAAR++GVNNRTLWLEYKK+GYP +RPSI
Sbjct: 551 VVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSI 610
Query: 205 KSRI 208
K+R+
Sbjct: 611 KARV 614
>AE014296-569|AAF47721.2| 743|Drosophila melanogaster CG11494-PA,
isoform A protein.
Length = 743
Score = 112 bits (270), Expect = 4e-25
Identities = 63/184 (34%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 27 VPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGMDANTGGIQQGAQWSMMEHTYPRYTNA 86
V +R+ + + QQ Q + Q A+ G +Q + + Y A
Sbjct: 431 VNSDQRQQHEAQQQATQQQQHLQQLHYQQQQQQEQASASGQAYSSQIITVNNLVGSYATA 490
Query: 87 CIGSAGLQPEAGMYMNNVMEHHMEGEMNEYAQGLGVGPSXXXXXXXXXXXXXXX--XXXX 144
+ P + +V + G+G +
Sbjct: 491 AQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGVGGASAAGGAAGNASAGNGGAPGAANQ 550
Query: 145 XXKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSI 204
KR+R+ NPQ +ENF RALEAVR GGIGFCKAAR++GVNNRTLWLEYKK+GYP +RPSI
Sbjct: 551 VVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSI 610
Query: 205 KSRI 208
K+R+
Sbjct: 611 KARV 614
>X90986-3|CAA62475.1| 660|Drosophila melanogaster pipsqueak
protein.
Length = 660
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 348 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 397
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 414 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 457
>X90986-2|CAA62474.1| 1085|Drosophila melanogaster pipsqueak
protein.
Length = 1085
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 773 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 822
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 839 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 882
>U48402-1|AAC47154.1| 646|Drosophila melanogaster PsqB protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 354 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 420 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 463
>U48358-1|AAC47153.1| 1065|Drosophila melanogaster PsqA protein.
Length = 1065
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 773 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 822
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 839 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 882
>AY069588-1|AAL39733.1| 1064|Drosophila melanogaster LD33470p
protein.
Length = 1064
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 773 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 822
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 839 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 882
>AE013599-1152|AAX52714.1| 639|Drosophila melanogaster CG2368-PK,
isoform K protein.
Length = 639
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 348 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 397
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 414 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 457
>AE013599-1151|AAX52713.1| 639|Drosophila melanogaster CG2368-PJ,
isoform J protein.
Length = 639
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 348 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 397
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 414 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 457
>AE013599-1150|AAX52712.1| 639|Drosophila melanogaster CG2368-PI,
isoform I protein.
Length = 639
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 348 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 397
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 414 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 457
>AE013599-1149|AAO41434.1| 645|Drosophila melanogaster CG2368-PH,
isoform H protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 354 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 420 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 463
>AE013599-1148|AAO41433.1| 645|Drosophila melanogaster CG2368-PG,
isoform G protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 354 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 420 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 463
>AE013599-1147|AAO41432.1| 645|Drosophila melanogaster CG2368-PF,
isoform F protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 354 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 420 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 463
>AE013599-1146|AAM68770.1| 645|Drosophila melanogaster CG2368-PE,
isoform E protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 354 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 420 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 463
>AE013599-1145|AAM68769.1| 645|Drosophila melanogaster CG2368-PD,
isoform D protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 354 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 420 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 463
>AE013599-1143|AAF58770.1| 1046|Drosophila melanogaster CG2368-PA,
isoform A protein.
Length = 1046
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 755 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 804
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 821 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 864
>AE013599-1142|AAS64878.1| 1064|Drosophila melanogaster CG2368-PC,
isoform C protein.
Length = 1064
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 773 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 822
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 839 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 882
>AE013599-1141|AAF58769.1| 1064|Drosophila melanogaster CG2368-PB,
isoform B protein.
Length = 1064
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKG 196
K+ T +E+ Q ALEA+R G I KA++ FG+ + TL+ +++G
Sbjct: 773 KKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREG 822
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 158 ENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNR 201
E+ +RALEA+R G KA+ FG+ TL+ K++G +R
Sbjct: 839 EDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSR 882
>BT003272-1|AAO25029.1| 1109|Drosophila melanogaster LD16921p
protein.
Length = 1109
Score = 31.5 bits (68), Expect = 1.3
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 22 ITLSSVPQQRRRDYHDDRTVENSQQTTDQQNM-NIDQVGMDANTGG-IQQGAQWSMMEHT 79
+ S QQ++ +H + QQ QQ+M ++D +G + GG + G MM +
Sbjct: 143 VAASQQHQQQQPHHH-----QQQQQQQQQQHMGSMDAMGGYSQMGGGMHPGPNSGMMGNM 197
Query: 80 YPRYTNACIGSAGLQPEAGMYMN-------NVMEHHMEGEMNEYAQGLGVGP 124
+Y N G G GM M HH MN+ Q + +GP
Sbjct: 198 NGQYMNGGSGQGGYNGAQGMGMGYGGGGSMGPQRHHQMTPMNQ-MQNMSMGP 248
>AE014296-1852|AAF50133.2| 1149|Drosophila melanogaster CG7958-PB,
isoform B protein.
Length = 1149
Score = 31.5 bits (68), Expect = 1.3
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 22 ITLSSVPQQRRRDYHDDRTVENSQQTTDQQNM-NIDQVGMDANTGG-IQQGAQWSMMEHT 79
+ S QQ++ +H + QQ QQ+M ++D +G + GG + G MM +
Sbjct: 183 VAASQQHQQQQPHHH-----QQQQQQQQQQHMGSMDAMGGYSQMGGGMHPGPNSGMMGNM 237
Query: 80 YPRYTNACIGSAGLQPEAGMYMN-------NVMEHHMEGEMNEYAQGLGVGP 124
+Y N G G GM M HH MN+ Q + +GP
Sbjct: 238 NGQYMNGGSGQGGYNGAQGMGMGYGGGGSMGPQRHHQMTPMNQ-MQNMSMGP 288
>AE014296-1851|AAF50134.3| 1135|Drosophila melanogaster CG7958-PA,
isoform A protein.
Length = 1135
Score = 31.5 bits (68), Expect = 1.3
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 22 ITLSSVPQQRRRDYHDDRTVENSQQTTDQQNM-NIDQVGMDANTGG-IQQGAQWSMMEHT 79
+ S QQ++ +H + QQ QQ+M ++D +G + GG + G MM +
Sbjct: 169 VAASQQHQQQQPHHH-----QQQQQQQQQQHMGSMDAMGGYSQMGGGMHPGPNSGMMGNM 223
Query: 80 YPRYTNACIGSAGLQPEAGMYMN-------NVMEHHMEGEMNEYAQGLGVGP 124
+Y N G G GM M HH MN+ Q + +GP
Sbjct: 224 NGQYMNGGSGQGGYNGAQGMGMGYGGGGSMGPQRHHQMTPMNQ-MQNMSMGP 274
>S64530-1|AAB27802.2| 180|Drosophila melanogaster defective
chorion-1 eggshell proteinprotein.
Length = 180
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 30 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 89
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 90 SEEQAKIQQNQQ 101
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 4 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 63
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 64 SEEQAKIQQNQQ 75
>S64529-1|AAB27801.2| 206|Drosophila melanogaster defective
chorion-1 eggshell proteinprotein.
Length = 206
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 56 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 115
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 116 SEEQAKIQQNQQ 127
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 4 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 63
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 64 SEEQAKIQQNQQ 75
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 30 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 89
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 90 SEEQAKIQQNQQ 101
>M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective
chorion-1 fc177 proteinprecursor protein.
Length = 1589
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 548 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 607
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 608 SEEQAKIQQNQQ 619
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 496 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 555
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 556 SEEQAKIQQNQQ 567
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 522 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 581
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 582 SEEQAKIQQNQQ 593
>M35888-1|AAA28447.1| 950|Drosophila melanogaster defective
chorion-1 fc106 proteinprecursor protein.
Length = 950
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 548 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 607
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 608 SEEQAKIQQNQQ 619
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 496 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 555
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 556 SEEQAKIQQNQQ 567
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 522 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 581
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 582 SEEQAKIQQNQQ 593
>M35887-1|AAA28446.1| 1123|Drosophila melanogaster defective
chorion-1 fc125 proteinprecursor protein.
Length = 1123
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 548 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 607
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 608 SEEQAKIQQNQQ 619
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 496 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 555
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 556 SEEQAKIQQNQQ 567
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 522 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 581
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 582 SEEQAKIQQNQQ 593
>AE014298-1067|AAN09216.1| 950|Drosophila melanogaster CG2175-PC,
isoform C protein.
Length = 950
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 548 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 607
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 608 SEEQAKIQQNQQ 619
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 496 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 555
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 556 SEEQAKIQQNQQ 567
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 522 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 581
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 582 SEEQAKIQQNQQ 593
>AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA,
isoform A protein.
Length = 1590
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 548 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 607
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 608 SEEQAKIQQNQQ 619
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 496 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 555
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 556 SEEQAKIQQNQQ 567
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 522 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 581
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 582 SEEQAKIQQNQQ 593
>AE014298-1065|AAN09215.1| 1208|Drosophila melanogaster CG2175-PB,
isoform B protein.
Length = 1208
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 548 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQW 607
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 608 SEEQAKIQQNQQ 619
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 496 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 555
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 556 SEEQAKIQQNQQ 567
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 522 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 581
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 582 SEEQAKIQQNQQ 593
>X76231-1|CAA53816.1| 172|Drosophila melanogaster fc proteins
protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 72 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 131
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 132 SEEQAKIQQNQQ 143
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 98 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 157
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 158 SEEQAKIQQNQQ 169
>S64532-1|AAB27804.2| 154|Drosophila melanogaster defective
chorion-1 eggshell proteinprotein.
Length = 154
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 4 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 63
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 64 SEEQAKIQQNQQ 75
>S64531-1|AAB27803.2| 180|Drosophila melanogaster defective
chorion-1 eggshell proteinprotein.
Length = 180
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 4 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 63
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 64 SEEQAKIQQNQQ 75
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVMGEEHRSEEAHNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGM 60
M+M + SEE I ++ I + + Q+R+ + ++ +QQ Q M + Q
Sbjct: 30 MMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQW 89
Query: 61 DANTGGIQQGAQ 72
IQQ Q
Sbjct: 90 SEEQAKIQQNQQ 101
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 29.1 bits (62), Expect = 6.9
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 13 HNIDMMRESITLSSVPQQRRRDYHDDRTVENSQQTTDQQNMNIDQVGMDANTGGIQQGAQ 72
HN ++ R + L QQ R + D ++ + N+N +Q QQ Q
Sbjct: 55 HNANISRNNAMLQLQQQQLRAPWITDCNKQHHINNNNSMNVNYNQ---QLTQQPQQQQQQ 111
Query: 73 WSMMEHTYPRYT 84
M+H Y YT
Sbjct: 112 TQYMQHNYNNYT 123
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.131 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,500,727
Number of Sequences: 52641
Number of extensions: 465391
Number of successful extensions: 1257
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 106
length of query: 273
length of database: 24,830,863
effective HSP length: 84
effective length of query: 189
effective length of database: 20,409,019
effective search space: 3857304591
effective search space used: 3857304591
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -