GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002026-TA|BGIBMGA002026-PA|IPR013069|BTB/POZ,
IPR000210|BTB
         (173 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.79 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   4.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.79
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 85  FMYYGEVNVTEEQLPQVLDTAKLLKIKG 112
           F Y+G+  V  E +  V D A+ +K KG
Sbjct: 931 FAYHGDQWVGFEDIKSVRDKAEYIKTKG 958


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 3   QQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHL 41
           + YSL+  NH+  F +M   +LN +    V  + + + L
Sbjct: 322 ENYSLQLINHRVVFTAMGLYVLNMEHFFSVKCSIQSESL 360


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 18  SMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFV 60
           +M TT L+ + L+D  L    + +Q+  V+   C+T   A F+
Sbjct: 254 NMLTTPLSEEVLLDELLRHFPERIQSLWVLEKICTTTDAAEFL 296


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 135 PGESVDSQRHSASPASSPSNKRKRFVLVNSTVISLCD 171
           PGE     R + SPA + S  +  + L++    +  D
Sbjct: 80  PGEKWKEMRATLSPAFTSSKIKNMYSLISECAENFVD 116


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 151 SPSNKRKRFVLVNSTVISL 169
           S  N +KRFV++ S +++L
Sbjct: 158 SSINMKKRFVVMTSVIMTL 176


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 131 DFQSPGESVDSQRHSASPASSPSNKRKRFVLVNSTVIS 168
           DF  PG  + ++        + +  ++ +  VNSTV++
Sbjct: 205 DFHIPGGGIAAENSPLYWGGADTPWQREYENVNSTVVN 242


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,259
Number of Sequences: 317
Number of extensions: 1402
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 173
length of database: 114,650
effective HSP length: 53
effective length of query: 120
effective length of database: 97,849
effective search space: 11741880
effective search space used: 11741880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)