GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002025-TA|BGIBMGA002025-PA|undefined
         (165 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   0.74 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.2  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)

Query: 146 KSLYLFKELRAVNHNGGFW 164
           K  Y+F+ L   N+NGGFW
Sbjct: 369 KGSYIFR-LPDENNNGGFW 386


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 14  KLIFIISNVDARIFCEKNKMPLEVGEWHKDYKQM 47
           KLI ++  ++ R   +K K PL +      YK++
Sbjct: 779 KLIQVVPTMELRREFDKQKPPLILAAAISGYKEV 812


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,585
Number of Sequences: 317
Number of extensions: 1545
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 165
length of database: 114,650
effective HSP length: 52
effective length of query: 113
effective length of database: 98,166
effective search space: 11092758
effective search space used: 11092758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)